Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi35g00022 ATGGCTATTGAAATGATTGATCTTACAAACTCGCCCCCATCACCACCCAAGTCCCCATCTGAGGCACAAATGATCCTTAATTTTGGTGTTGTTTCTACAGAAAATGTTGCTACGATTCTTCAACCAGTACCTGAATCAAGCACATTCTTGCTTCCTCATGGTGTTAGGCCTGAGGAGCCTTGGACTGAAATAGAGCATGAGTTATTTTTGGCGGGGCTAATCAAGTATGGAAAAGGACATTGGACAAAAATTGCTAGACATTTTCTAGGGAACAAGACACCACAACAAGTTCAAAGCTATGCTACTGGCTTCTTCAGGAACCTACCAGCCACACACTTTTTCAACTATAGGAGAAGGAAACCCGCCAACCATTCCGCTGGTAGACTTATGGCCAGAAACAGGAACCTCATGAATGCACCTGCCTCCCATTCCATGCAAATGGTTCTTAACAAACCACAACAAACCCTCACTCTCTTCCCAGAAAAAACTCATTTTTCTCAGGTTTCACCATTCGGAGAAGGTAGCAGTAGCATCAACCATATCCACGGGTTCCAGATGCTGACAGGTGGTGCAAGCACTTCCATGACAACTAGTGCTAATGGAGAAGTTGATTTGGAACTGTGCTTGGGAAGATATTAG 639 0.4413 MAIEMIDLTNSPPSPPKSPSEAQMILNFGVVSTENVATILQPVPESSTFLLPHGVRPEEPWTEIEHELFLAGLIKYGKGHWTKIARHFLGNKTPQQVQSYATGFFRNLPATHFFNYRRRKPANHSAGRLMARNRNLMNAPASHSMQMVLNKPQQTLTLFPEKTHFSQVSPFGEGSSSINHIHGFQMLTGGASTSMTTSANGEVDLELCLGRY 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi35g00022 212 CDD SANT 60 101 IPR001005 -
Sebi35g00022 212 Gene3D - 59 109 - -
Sebi35g00022 212 SMART sant 57 107 IPR001005 -
Sebi35g00022 212 Pfam Myb-like DNA-binding domain 59 100 IPR001005 -
Sebi35g00022 212 ProSiteProfiles Myb-like domain profile. 60 105 IPR001005 -
Sebi35g00022 212 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 56 108 IPR043363 -
Sebi35g00022 212 ProSiteProfiles SANT domain profile. 56 109 IPR017884 -
Sebi35g00022 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 109 IPR017930 -
Sebi35g00022 212 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 105 IPR006447 GO:0003677
Sebi35g00022 212 SUPERFAMILY Homeodomain-like 60 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi35g00022 Sebi-Chr35 713112 714127 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi35g00022 Myb_DNA-binding 5.4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi35g00022 - - gsj:114414101 211.46