Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi35g00021 ATGACCCTTCATACTGATTCAGCACCATCGCCTCGTCCCCCGGATTCCGCCACCGCCACCGCAAACGGCGCAACTACGCCGGAAGAAAACCCAGCGCTGCCGCCGCCACCACCATCATCATCGTCATCTCCTCTTCCACCGCCATCACTTCCAAGCCCACCGGAAGAACTGCGAGTACCAATATGGTGGCCGGAAGATGGGAAGCTAAGCAGGGATTGGATCGAGAATCTGATGTCATGCTTCGATTGGTCTTCGAGGAACATCCCTCCCTCCGAGTTCCCTTCAGTTCTTCCCGTTCAAGTATTCGACTCCCTCATCCTCATCGCTTCCAAGATGCTTCACAAGGAGCCCAATTGTGTGACAATCGACCCATTTCGACCCGAACTCGATGCTTCCGCCGCCACCGTGGTGGTGGTTGGAGATGTACACGGGCAATTGCATGATCTGCTGTTCCTCCTCCGAGATGCCGGTTATCCCTCCCAGGATCGAATCTTTGTCTTCAATGGCGATTATGTCGATCGAGGGGCTTGGGGCCTCGAAACTTTCTTACTCTTGTTGGCTTGGAAGGTATTCATGCCGCATAACATATATTTGCTAAGAGGAAATCATGAATCGAAATACTGCACGTCAGTGTATGGTTTTGAGAAAGAAGTAATGGTAAAGTATGGTGATAAAGGTAAGCATGTGTACCGGAAATGTTTGGGATGCTTTGAAGGTCTTCCTTTGGCTTCTATTATAGCGGGGTGTGTATACACTGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGACGCCGTCAAAGAGATTAAAAGGAAAGAAGAACCGTAAGATTAATGTTAATCCTGACAGCAAAAATCTCTCTCTTGGTTCCTTGGAAGAATTGTGTAAGGCTCGACGATCAGTTCTTGATCCTCCTTGGGAAGGCTCAAACTTGATTCCAGGTGATGTTTTGTGGTCTGATCCATCAAAATCTCCTGGTCTTGCTCCAAACAAAGAAAGAGGCATTGGCTTGTTGTGGGGTCCTGATTGCACTGAAGAATTTTTGAAGAAGTACCAACTGAAGTTGATCATCAGGTCACATGAAGGTCCTGATGCTAGGGAGAAAAGGGATGGTTTTGATGGAATGGCTGAAGGTTACACTATTGATCATATTGTGGACTCTGGAAAATTGGTCACCCTATTTAGTGCTCCAGATTACCCACAATTTCAGGCAACAGAAGAGAGGTATAACAACAAAGGTGCTTATGTTGTCCTTGAACCCCCGAATTTTGACAATCCTATATTTCATGGATTTTCGGCAGTTACTCCAAGACCAAAGGTTAACCCCTATTACGATTATGAAGAAGTGATAGATTCTGATGAAGAATTGGACTTGGCCTCCATGGTAACTGCCTGA 1395 0.4688 MTLHTDSAPSPRPPDSATATANGATTPEENPALPPPPPSSSSSPLPPPSLPSPPEELRVPIWWPEDGKLSRDWIENLMSCFDWSSRNIPPSEFPSVLPVQVFDSLILIASKMLHKEPNCVTIDPFRPELDASAATVVVVGDVHGQLHDLLFLLRDAGYPSQDRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPHNIYLLRGNHESKYCTSVYGFEKEVMVKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVTPSKRLKGKKNRKINVNPDSKNLSLGSLEELCKARRSVLDPPWEGSNLIPGDVLWSDPSKSPGLAPNKERGIGLLWGPDCTEEFLKKYQLKLIIRSHEGPDAREKRDGFDGMAEGYTIDHIVDSGKLVTLFSAPDYPQFQATEERYNNKGAYVVLEPPNFDNPIFHGFSAVTPRPKVNPYYDYEEVIDSDEELDLASMVTA 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi35g00021 464 SMART pp2a_7 97 438 IPR006186 GO:0016787
Sebi35g00021 464 FunFam Serine/threonine-protein phosphatase 81 459 - -
Sebi35g00021 464 ProSitePatterns Serine/threonine specific protein phosphatases signature. 199 204 IPR006186 GO:0016787
Sebi35g00021 464 CDD MPP_PP7 63 445 IPR041754 -
Sebi35g00021 464 Gene3D - 92 454 IPR029052 -
Sebi35g00021 464 MobiDBLite consensus disorder prediction 1 27 - -
Sebi35g00021 464 SUPERFAMILY Metallo-dependent phosphatases 92 440 IPR029052 -
Sebi35g00021 464 PRINTS Serine/threonine phosphatase family signature 165 192 IPR006186 GO:0016787
Sebi35g00021 464 PRINTS Serine/threonine phosphatase family signature 295 322 IPR006186 GO:0016787
Sebi35g00021 464 PRINTS Serine/threonine phosphatase family signature 198 222 IPR006186 GO:0016787
Sebi35g00021 464 PRINTS Serine/threonine phosphatase family signature 135 162 IPR006186 GO:0016787
Sebi35g00021 464 PRINTS Serine/threonine phosphatase family signature 235 261 IPR006186 GO:0016787
Sebi35g00021 464 PRINTS Serine/threonine phosphatase family signature 389 405 IPR006186 GO:0016787
Sebi35g00021 464 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 59 461 - -
Sebi35g00021 464 MobiDBLite consensus disorder prediction 1 57 - -
Sebi35g00021 464 Pfam Calcineurin-like phosphoesterase 135 363 IPR004843 GO:0016787
Sebi35g00021 464 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi35g00021 Sebi-Chr35 650333 658558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi35g00021 60 355 Calmodulin-binding Proteins AT5G63870 72.391 1.69e-159 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi35g00021 K04460 - gmx:100802851 808.52