Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi358g00034 ATGGTGGTGCTCCCTTTCCCCTATTTGGGAGGGTTTGTGGCGGCTGCAACTTCAACTTCAAATGTGTCATCCTCAAGACCCTCTGTTGTGAATATCGGAGCTATCTTTACCTTTGATTCCGTGATTGGGAAAGTTGCTAAAATAGCCATGGAGGAAGCTGTGAAGGACATAAACGCCAATACCAACATTCTACATGGAACTAAACTCGTTCTTCATATGCAAACTTCCAATTGCAGTGGTTTTGATGGCATGGTTCAAGCTTTGAGGTTCATGGAGACTGATGTAGTTGCTATATTAGGTCCACAATCTTCTGTGGTTGCCCACATAATATCCCATGTTGCAAATGAGCTAAGGGTTCCTTTATTGTCATTTGCTGCAACAGACCCTACACTTTCATCACTTCAGTTCCCTTTTTTTGTGAGGACCACACTGAGTGATTTGTACCAAATGGCTGCTGTTGCTGAAATCATTGACCATTATGGTTGGAAGGAAGTGATTGCTTTATATGTAGATGATGATTATGGAAGAAATGGTGTGTCTGCATTAGATGATGCATTAGCAGCTAGGCGCTGTAGAATCTCCTATAAGGCTGGGATTAAATCAGGAGCTGAAGTTGACAAGGGTGAAATCACCAATTTGCTTGTGCAGGTGGCATTGATGCAATCTAGGGTCATTGTTCTCCATGTACATTCTAATTCTGGTTTTATGATCTTCAATGTGGCACGTTATCTTGGGATGATACAAGAAGGCTATGTCTGGATAGCCACAGATTGGCTCTCAACTGTTCTAGATTCTTCTTCTCTCCCTTCAGAGACAATGGATGTTCTTCAAGGAGTGCTTGTTCTGCGCCAGCATACACCTGATTCAGATAAAAAAAGAGCATTTTTCTCTAGGTGGAACAAGTTAACTGGTGGCTCTTTGGGGTTACATTCTTATGGCCTTCATGCTTATGATACTGTTTGGCTGGTTGCACAGGCTGTTGATGCATTTTTCAGCCAGGGTGGGGTTGTTTCATGTACCAATTACACTAGTTTACATGATGATAAGGGAAGTGGTCTTAATCTTGATGCAATGAGCATTTTTGACAATGGAACTCTTCTGTTGAACAACATATTGAAGAGTAATTTTGTTGGATTGACAGGTCCAGTGAAATTTCAACCAGACAAATCTCTTGTTCGTCCTGCATATGACATCATTAATGTGGTTGGAACTGGCATGCGTAGGATTGGTTATTGGTCCAACTATTCTGGTCTTTCAATTGTGCCTCCTGAGATATTGTATGCTAAGCCACCTAATAGATCAAGTGCAAACCAGCAACTTAGCAGTGTGATATGGCCTGGAGAAACATTATCCAAGCCCCGTGGATGGGTATTCCCAAATAATGGAAAACAATTGAGAATTGGTGTGCCTATCAGAGTTAGTTTCCGTGAATTTGTGTCTCCAGTGCAGGGAACAGATATGTTTAAAGGTTTTTGTGTTGATGTATTCATTGCAGCTGTAAACTTGTTACCATATGCTGTTCCATACCGTTTTGTGCCATTTGGAGATGGTCATCAAAATCCAAGCTACACAGAACTTGTCAGGTTAATCACCACTGGTTACTTTGATGGTGCCATTGGTGACATTGCCATTGTCACAAACCGGACTAGAGTGGTAGATTTTACACAGCCATATGCTGCATCTGGACTTGTTGTGGTGGCACCTTTTAAGAAGATCAATTCTGGTGGTTGGTCTTTCCTGCAGCCATTCACTCCTCTTATGTGGACTGTCACTGCTTGTTTCTTCTTTTTCATTGGGATAGTTGTATGGACTCTGGAACACAGGATAAATGATGAGTTCAGGGGTCCACCTAAACAACAAATTATAACCATTTTCTGCTACACTGCAAGTTTAACATCCATACTCACAGTTCAGCAGTTATCTTCTCCTATCAATGGAATAGATAGCCTAAAAGCTAGTAATGAACCTATAGGTTTCCAAGTGGGTTCATTTGCAGAACGGTACTTGAGTGAAGATCTTGGAATATCCAAATCTAGACTTGTTCCCCTTGGATCTCCAGAAGCATATGCTAAGGCACTCCAGCTTGGTCCTAATAATGGAGGTGTTGCTGCTATTGTTGATGAACGATCTTATGTAGAAATCTTCTTATCAACACAGTGCACATTCAGGATTGTAGGTCAGGAGTTCACCAGAAGTGGCTGGGGTTTTATTATGTGTCAGTTATGGCATTCTGCTCCTTCTGAATCTGCTTCAAATGTTAGCCCGATTCAAAGATTTCTTTCACTCATTGATGAGAAGGAAGATCCATCAAGGAGTGGAAGAAGAAAGAGGAATGGAGAAGAAAGATCACTTGAAGATCAAATGGGAAGGCAGCCAAAGAGGATACAAACAGAAACAACAGCTGAATTCAAATCAAACAATTAA 2424 0.413 MVVLPFPYLGGFVAAATSTSNVSSSRPSVVNIGAIFTFDSVIGKVAKIAMEEAVKDINANTNILHGTKLVLHMQTSNCSGFDGMVQALRFMETDVVAILGPQSSVVAHIISHVANELRVPLLSFAATDPTLSSLQFPFFVRTTLSDLYQMAAVAEIIDHYGWKEVIALYVDDDYGRNGVSALDDALAARRCRISYKAGIKSGAEVDKGEITNLLVQVALMQSRVIVLHVHSNSGFMIFNVARYLGMIQEGYVWIATDWLSTVLDSSSLPSETMDVLQGVLVLRQHTPDSDKKRAFFSRWNKLTGGSLGLHSYGLHAYDTVWLVAQAVDAFFSQGGVVSCTNYTSLHDDKGSGLNLDAMSIFDNGTLLLNNILKSNFVGLTGPVKFQPDKSLVRPAYDIINVVGTGMRRIGYWSNYSGLSIVPPEILYAKPPNRSSANQQLSSVIWPGETLSKPRGWVFPNNGKQLRIGVPIRVSFREFVSPVQGTDMFKGFCVDVFIAAVNLLPYAVPYRFVPFGDGHQNPSYTELVRLITTGYFDGAIGDIAIVTNRTRVVDFTQPYAASGLVVVAPFKKINSGGWSFLQPFTPLMWTVTACFFFFIGIVVWTLEHRINDEFRGPPKQQIITIFCYTASLTSILTVQQLSSPINGIDSLKASNEPIGFQVGSFAERYLSEDLGISKSRLVPLGSPEAYAKALQLGPNNGGVAAIVDERSYVEIFLSTQCTFRIVGQEFTRSGWGFIMCQLWHSAPSESASNVSPIQRFLSLIDEKEDPSRSGRRKRNGEERSLEDQMGRQPKRIQTETTAEFKSNN 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi358g00034 807 Pfam Bacterial extracellular solute-binding proteins, family 3 488 715 IPR001638 -
Sebi358g00034 807 PRINTS Metabotropic glutamate GPCR signature 98 124 IPR000337 GO:0004930|GO:0007186|GO:0016020
Sebi358g00034 807 PRINTS Metabotropic glutamate GPCR signature 149 165 IPR000337 GO:0004930|GO:0007186|GO:0016020
Sebi358g00034 807 PRINTS Metabotropic glutamate GPCR signature 165 182 IPR000337 GO:0004930|GO:0007186|GO:0016020
Sebi358g00034 807 PRINTS Metabotropic glutamate GPCR signature 130 149 IPR000337 GO:0004930|GO:0007186|GO:0016020
Sebi358g00034 807 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 743 IPR015683 -
Sebi358g00034 807 MobiDBLite consensus disorder prediction 793 807 - -
Sebi358g00034 807 MobiDBLite consensus disorder prediction 764 807 - -
Sebi358g00034 807 Pfam Receptor family ligand binding region 48 403 IPR001828 -
Sebi358g00034 807 MobiDBLite consensus disorder prediction 764 792 - -
Sebi358g00034 807 FunFam Glutamate receptor 460 575 - -
Sebi358g00034 807 SUPERFAMILY Periplasmic binding protein-like II 441 738 - -
Sebi358g00034 807 Gene3D - 460 574 - -
Sebi358g00034 807 CDD GluR_Plant 463 736 - -
Sebi358g00034 807 SMART GluR_14 466 768 IPR001320 GO:0015276|GO:0016020
Sebi358g00034 807 Gene3D - 637 733 - -
Sebi358g00034 807 FunFam Glutamate receptor 699 734 - -
Sebi358g00034 807 PIRSF IGluLR_plant 2 627 IPR017103 -
Sebi358g00034 807 PIRSF IGluLR_plant 626 741 IPR017103 -
Sebi358g00034 807 Gene3D - 575 621 - -
Sebi358g00034 807 CDD PBP1_GABAb_receptor_plant 31 422 IPR044440 -
Sebi358g00034 807 Gene3D - 48 393 - -
Sebi358g00034 807 Gene3D - 145 418 - -
Sebi358g00034 807 FunFam Glutamate receptor 145 297 - -
Sebi358g00034 807 SUPERFAMILY Periplasmic binding protein-like I 24 457 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi358g00034 Sebi-Chr358 854422 858406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi358g00034 24 736 Ion Channels AT1G42540 64.096 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi358g00034 K05387 - gmx:102661260 1211.05