Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi357g00004 ATGTCTTTCGTGGCGCGGCACTATACTTCCGTCTCCTCAACATCGAGCACCTTCCTCTTCCGGCTTTGCAAGGACGTCGCTCACAGCCACAGCTACGGCGTCCTCCACCGCGATCTCAAGCCACAGAACCTCCTTCTCGATCAGCAAAAGGGGATTCTCAAGATCGTTGAGCTTGGCATTGGACGCGCCTTCACTGTTCCTCTCGATAGCTACACTCACGAGATCGTCACCCTCTGCTACAGAGAACCTGAGGTTCTCCTCGGTTCCACACATTACTCCATCGGCGTTGACATGTGGTCCATTAAATGCATCTTTGCTGAAATGGTGAGAAGGCAGGCTCTGTTTCTTGGGGATTCTGAATTCCAGCAGCTCCTTAACATATTCAAGTATGACAATCACGCTTATCAAAACCAGGTTAGAAATTCCCATGTCTGA 435 0.5034 MSFVARHYTSVSSTSSTFLFRLCKDVAHSHSYGVLHRDLKPQNLLLDQQKGILKIVELGIGRAFTVPLDSYTHEIVTLCYREPEVLLGSTHYSIGVDMWSIKCIFAEMVRRQALFLGDSEFQQLLNIFKYDNHAYQNQVRNSHV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi357g00004 144 Pfam Protein kinase domain 16 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi357g00004 144 ProSitePatterns Serine/Threonine protein kinases active-site signature. 34 46 IPR008271 GO:0004672|GO:0006468
Sebi357g00004 144 Gene3D Transferase(Phosphotransferase) domain 1 14 130 - -
Sebi357g00004 144 SUPERFAMILY Protein kinase-like (PK-like) 17 130 IPR011009 -
Sebi357g00004 144 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi357g00004 144 SMART serkin_6 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi357g00004 144 PANTHER CELL DIVISION PROTEIN KINASE 13 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi357g00004 Sebi-Chr357 80140 80769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi357g00004 18 144 Core Cell Cycle Gene Families AT3G54180 69.925 4.65e-62 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Sebi357g00004 Pkinase 2.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi357g00004 K07760 - qsa:O6P43_016425 196.823