Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi356g00066 ATGGAAGAGGTACTGTGTGAACTTAGTGATCATGAAAAGAGAAACGAGCAAGGTCTGCCACCGGGCTTTAGGTTTCATCCAACTGATGAAGAACTCATAACCTTTTATTTGGCTTCAAAGGTGTTTAATGCCACCTTCACTACCAATGTCAACTTTGCCGAAGTTGACCTCAATAGGTGTGAGCCTTGGGAACTTCCAGATGTGGCAAAGATGGGGGAAAGAGAGTGGTACCTGTTCAGCTTGAGGGACAGAAAATACCCAACAGGACTAAGAACTAACAGAGCAACTGGAGCTGGCTACTGGAAGGCCACTGGGAAGGACAAGGAAGTTTACAGTGCCTCAAATGGTGCCCTACTTGGGATGAAGAAGACCCTTGTTTTCTACAAAGGCAGGGCCCCTCGTGGTAAAAAGACCAAATGGGTCATGCATGAGTACCGTTTGGATGGTCACTTTTCCCTTTCTCACCCTCACACCTGTAAGGAGGAGTGGGTGATATGCAGGATATTTCATAAATCTGGGGAAAAGAGAAGTGCAATGCTCCAAGTCCAAGGACAATTGGACACAAAAGGTTCTTCTTTACCACATGCAACTTCCTTTACATTGGAACTAGAATCTCAATCCCAAAGCACTTTCCAAAGCCAAATTCTGAATATTCCCCACCAACACCAAAATGATCATCTTTTCCCATTCCAAACATCTTTCCCAATCACTGCTGCTACAGCTACAGATACACAACCAGCAGAAATCACCTACACCACCACTAGAAACAACCATCCATCTTCTCAATCTCAATTACTATTCCTCAAGGTCAAGGAGCAAGCCATCCCAAAACTAACCAAAACAGAGGCTCCATTCTGTGAATACCAATCACTAGATGGCACTAATAACTTGAGCAGCTGGATAGAGAAGCTGAACCCAAATCCAAGTAATTTCCAGAACCCCTTCCCTCTTGAGATGGATGGTGCATCCCTGATGGTGTTGTCTGGGAGCACAAATGCTGAATTTAGGGAGATGAACAAAATAGGATTGCAACAGATGATGCAGCAGCTAGATGCTCCTATTCCTATGGGAATAGATTCTTGGCCACAGGCCCAGCATGTCTAA 1104 0.4475 MEEVLCELSDHEKRNEQGLPPGFRFHPTDEELITFYLASKVFNATFTTNVNFAEVDLNRCEPWELPDVAKMGEREWYLFSLRDRKYPTGLRTNRATGAGYWKATGKDKEVYSASNGALLGMKKTLVFYKGRAPRGKKTKWVMHEYRLDGHFSLSHPHTCKEEWVICRIFHKSGEKRSAMLQVQGQLDTKGSSLPHATSFTLELESQSQSTFQSQILNIPHQHQNDHLFPFQTSFPITAATATDTQPAEITYTTTRNNHPSSQSQLLFLKVKEQAIPKLTKTEAPFCEYQSLDGTNNLSSWIEKLNPNPSNFQNPFPLEMDGASLMVLSGSTNAEFREMNKIGLQQMMQQLDAPIPMGIDSWPQAQHV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi356g00066 367 SUPERFAMILY NAC domain 14 171 IPR036093 GO:0003677|GO:0006355
Sebi356g00066 367 Pfam No apical meristem (NAM) protein 20 147 IPR003441 GO:0003677|GO:0006355
Sebi356g00066 367 ProSiteProfiles NAC domain profile. 19 171 IPR003441 GO:0003677|GO:0006355
Sebi356g00066 367 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 246 - -
Sebi356g00066 367 FunFam NAC domain-containing protein 100-like 28 175 - -
Sebi356g00066 367 Gene3D NAC domain 28 175 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi356g00066 Sebi-Chr356 919497 921658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi356g00066 1 228 NAC Transcription Factor Family AT1G76420 60.593 2.79e-97 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi356g00066 NAM 2.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi356g00066 - - gmx:100780313 430.254