Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi356g00046 ATGGCAGCGTCCGGCATCTCCTCCGGCGGTGCTCTGCCGGAGCTAACTAAACGAACTCCCATTCTAGGTCTCAAACTCTACGTCTTAATCCTCATTTTCGTCGTGACCGTGTTGGCAATCGCGCTCATCATCTTCCTCTGCATTCGCCGGAACCGAAGCTCCAAGAAGCGGAAAATGCGAGTGAAGCACAGCTCCGGCACAATCCCACTCGTCTCCAAGGAGATCGTGGAGGTGCTCAAAATCGAACACGTTGACGACGATGATCCGAAGAAACAGGAGGAATTGGATATTGAAGAGAGTGTGTCGGTGGAGTCTCCATCACCGAACATAGGGTGGGGACGCTGGTATAGCATGAAGGAACTGGAGATTGCAACAGATGGATTTGCAGAAGGGAACGTGATCGGAGAAGGAGGGTATGGGATTGTGTATAGAGGAATTCTGCAAGACGGTTCTGTCGTAGCTGTCAAGAATCTTCTCAACAACAAGGGTCAAGCAGAGAAAGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTGAGGCATAAGAATTTGGTGGGGTTAGTTGGATATTGTGCAGAAGGTGCTCGAAGCACGGGCATGCTTAATGAGGGCAGTGATGTGTATAGTTTTGGGATTCTACTTATGGAGCTAATTACAGGCAGAAGTCCCATTGATTATTCTAGGCCACCAGGAGAGATGAACTTGGTTGATTGGTTTAAGGGAATGGTAGCAAGTCGCCGTGGTGATGAGCTAGTTGATCCTTTAATTGAGATTCAGCCCTCTCCAAGATCTTTGAAGCGAGCTTTACTGGTTTGTCTGCGCTGTATAGATTTGGATGCCAGTAAGCGACCAAAGATGGGTCAGATTGTCCATATGCTTGAAGCGGATGATTTTCCCTTTCGTTCTGAACTTCGAACTAGAGAGAAAGATCCTGTTCCCTCTCAAGCAGCTGTTTCCAGTAAGGTTACATATCCAACAAGGCATGTGGAGCCCGTATATAAATCGAGCTGGAGATGA 1017 0.4779 MAASGISSGGALPELTKRTPILGLKLYVLILIFVVTVLAIALIIFLCIRRNRSSKKRKMRVKHSSGTIPLVSKEIVEVLKIEHVDDDDPKKQEELDIEESVSVESPSPNIGWGRWYSMKELEIATDGFAEGNVIGEGGYGIVYRGILQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGARSTGMLNEGSDVYSFGILLMELITGRSPIDYSRPPGEMNLVDWFKGMVASRRGDELVDPLIEIQPSPRSLKRALLVCLRCIDLDASKRPKMGQIVHMLEADDFPFRSELRTREKDPVPSQAAVSSKVTYPTRHVEPVYKSSWR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi356g00046 338 Gene3D Phosphorylase Kinase; domain 1 90 196 - -
Sebi356g00046 338 Pfam Protein tyrosine and serine/threonine kinase 200 293 IPR001245 GO:0004672|GO:0006468
Sebi356g00046 338 Pfam Protein tyrosine and serine/threonine kinase 131 194 IPR001245 GO:0004672|GO:0006468
Sebi356g00046 338 FunFam Probable serine/threonine-protein kinase At1g01540 108 202 - -
Sebi356g00046 338 Gene3D Transferase(Phosphotransferase) domain 1 197 295 - -
Sebi356g00046 338 SUPERFAMILY Protein kinase-like (PK-like) 114 302 IPR011009 -
Sebi356g00046 338 PANTHER OS01G0323000 PROTEIN 14 97 - -
Sebi356g00046 338 ProSitePatterns Protein kinases ATP-binding region signature. 134 156 IPR017441 GO:0005524
Sebi356g00046 338 ProSiteProfiles Protein kinase domain profile. 128 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi356g00046 Sebi-Chr356 614128 617613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi356g00046 110 191 Trihelix Transcription Factor Family AT1G23540 55.422 7.89e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Sebi356g00046 PK_Tyr_Ser-Thr 1.2e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi356g00046 - - gmx:100779420 270.011