Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi356g00044 ATGCCAAATGGGGACTTGTCTAATTCCTTATTCTACAAAAACGCTACATCTGAAGATGGCACTTTGCAGTCCTTGGACTGGATAACTAGGTTGAAAATTGCTACTGGAGCAGCAGAGGCCCTGACGTATCTGCATCAAGAATGTATTCCACCCATTGTTCACAGAGATATTCAAGCAAGCAGTATACTTCTAGATGATAAATATGAAGTTCGGTTAGGGAGTCTAAGTGAAGCATGTTCCCAAGAAGGTGATACTCATCAAAGTAAAATCACCCGGTTTCTGCGATTCCCTCAGTCCTCTGAACAAGGCACATCTGGTTCATCAACAACAATTTGTGCCTATGACGTGTATTGCTTTGGGAAAGTGTTACTTGAGCTGGTGACTGGTAAGCTGGGCATTAGTGCATCAAGTGATGGTGAAGTAAAGGAATGGCTTGATCAGATTCTACCTTGCATTAGTATGTATGACAAGGAGCTTGTGACAAAAATTGTGGATCCATCTCTGGTTGTTGATGAGGATTTCTTAGAGGAAGTGTGGGCTATAGCCATTGTTGCTAGGTCTTGCCTAAATCCCAAACCTTCAAGAAGACCCCCAATGAGACATGTTCTCAAAGCATTGGAAAACCCTTTAAAAGTTGTAAGGGAAGAAAATTTCAGTTCTGCAAGGCTTAAAGCAACATCTTCTAGAGGCTCTTGGAATGCTACTTTATTTGGTAGTTGGCGTCAGAGTTCATCTGATGTAGCAGTAATTCCAGCAGCCTCTGGGACAAAATTAGAAGGAACTAGTAGTTTAAAGCTTTCAGGAACTACAGGGTCACAGTCACAGGGTAGCTTCCACAATGGTGGGGCTGATATTTCATCATCTCTCGGAGGCGTCATTCAAATGATATATTCCCAGAGCCATCTGGTTTACATGATGTAG 921 0.4235 MPNGDLSNSLFYKNATSEDGTLQSLDWITRLKIATGAAEALTYLHQECIPPIVHRDIQASSILLDDKYEVRLGSLSEACSQEGDTHQSKITRFLRFPQSSEQGTSGSSTTICAYDVYCFGKVLLELVTGKLGISASSDGEVKEWLDQILPCISMYDKELVTKIVDPSLVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRHVLKALENPLKVVREENFSSARLKATSSRGSWNATLFGSWRQSSSDVAVIPAASGTKLEGTSSLKLSGTTGSQSQGSFHNGGADISSSLGGVIQMIYSQSHLVYMM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi356g00044 306 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 228 - -
Sebi356g00044 306 FunFam Putative LRR receptor-like serine/threonine-protein kinase 1 226 - -
Sebi356g00044 306 Gene3D Transferase(Phosphotransferase) domain 1 1 227 - -
Sebi356g00044 306 SUPERFAMILY Protein kinase-like (PK-like) 1 206 IPR011009 -
Sebi356g00044 306 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi356g00044 306 Pfam Protein kinase domain 31 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi356g00044 Sebi-Chr356 596986 599780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi356g00044 1 98 Miscellaneous Gene Families AT2G16250 70.408 7.04e-38 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Sebi356g00044 Pkinase 1.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi356g00044 - - gmx:100805769 500.745