Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi356g00036 ATGGCCTCAAGCAAACAAAAGGCTTGTGATTCATCTTGGAGTGCAAAGCAGAACAAGCTGTTTGAGAAGGCACTTGCAAAATATGACAAAGATACCCCTGACCGTTGGCAAAATGTAGCCAAAGCAGTTGGTGGTAAATCAGCAGAGGAAGTTAAGAGACACTATGAGTTACTCTTGGAAGATCTCAGACACATAGAGTCTGGTCATGTTCCCATTCCCAACTACAAATCCACAGGAACTGGCAATGTCTATGAAGAATGA 261 0.4291 MASSKQKACDSSWSAKQNKLFEKALAKYDKDTPDRWQNVAKAVGGKSAEEVKRHYELLLEDLRHIESGHVPIPNYKSTGTGNVYEE 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi356g00036 86 ProSiteProfiles Myb-like domain profile. 5 59 IPR001005 -
Sebi356g00036 86 ProSiteProfiles SANT domain profile. 10 63 IPR017884 -
Sebi356g00036 86 Pfam Myb-like DNA-binding domain 11 56 IPR001005 -
Sebi356g00036 86 Gene3D - 4 72 - -
Sebi356g00036 86 SMART sant 9 61 IPR001005 -
Sebi356g00036 86 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Sebi356g00036 86 SUPERFAMILY Homeodomain-like 11 67 IPR009057 -
Sebi356g00036 86 CDD SANT 12 59 IPR001005 -
Sebi356g00036 86 FunFam Transcription factor SRM1 5 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi356g00036 Sebi-Chr356 482119 482379 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi356g00036 Myb_DNA-binding 3.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi356g00036 - - gmx:100785292 150.984