Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi354g00044 ATGAAAATTCTTCAAGATGTAGTCCCTGGTTGTAACAAGGTAATTGGTAAAGCACTTGTCCTGGATGTGATAATAAATTACATCCAATCACTGCAGCGTCAGGTTGAGTTCCTTCCGATGAAGCTTGAGGCAGTTAATTTGAGATTGACCATGAACCCTACTATTGAATGTTTTCCATCAAAAGATGCAGATCTTCTTGAAGAAGGTTCCTTTGACTCTGCTGTTGAGGGCTCTGATGCTGTCTTCCACACTGCTTCACCCGCTCAGTTCATTGTCAAGGACCCCAGGCTGAATTAA 297 0.4242 MKILQDVVPGCNKVIGKALVLDVIINYIQSLQRQVEFLPMKLEAVNLRLTMNPTIECFPSKDADLLEEGSFDSAVEGSDAVFHTASPAQFIVKDPRLN 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi354g00044 98 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 31 IPR011598 GO:0046983
Sebi354g00044 98 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 76 IPR024097 GO:0006355
Sebi354g00044 98 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 50 IPR036638 GO:0046983
Sebi354g00044 98 Gene3D - 32 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi354g00044 Sebi-Chr354 924670 926399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi354g00044 1 66 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 80.303 1.52e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi354g00044 - - cave:132175693 110.538