Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi354g00037 ATGAGCAATGAGCAAGGTGAAGATGACTACCTTTTGGCTGAGGCAAGACAACCATTGTGGCGCAAAGTTCCAGTATCTTCAAGCCTAATCAATCCATACCGCATAGTCATAGTTATGCGTCTAGTTATTCTAGTTTTCTTCTTCCACTTCCGCATCTCAACACCAGTACATGATGCAATGGCCTTATGGATAATCTCTGTGGTCTGTGAAATATGGCTGGCTTTGTCTTGGATGGTGGACCAACTCCCCAAGTGGTTCCCCATGACTCGTGAAACTTCATTGGAGCGCTTGTCCATAAGGTTTGAACGTGAAGGGGAACCAAATCTTCTAGCCCCAGTTGATGTCTTTGTTACCACTGCAGACCCTTTTAAGGAACCACCTATTATAACAGCAAACACTGTTCTATCAGTCTTGTCTGTTGATTACCCTGTTGATAAGGTTAGCTGCTATGTCTCAGATGACAGTGCATCTATGCTTCTCTATGATACCTTGGCACTAACTGCTGAGTTTGCAAGAATATGGGTTCCTTTCTGTAAAAAGTATAGCATTGAACCAAGGGCTCCAGAGTCTTATTTCTCTCAGAAAGTTGATTACTTGAAAGATAAGGTGCACCCTACATTTGTAAGGGATCGCAGGGCCATGAAGAGAGAGTATGAAGAATTCAAGGTGAAAATTAATGTATTGGTTGCAAAGGCTCAGAAAAAACCAGAAGAGGGGTGGGTGATGCAAGATGGTAACCCATGGCCTGGGAATGAATCTGACAATCATCCAGGAATGATTCAGGTGTGTCTGGGAAGTGCTGGTGCACTGGACAATGAAGGCAAGGAACTCCCTCGGCTTGTGTATGTTTCACGGGAAAAACGTCCTGGCTATCAACACCACAGGAAAGCTGGTGCCATGAATGCTCTGGTTCGAGTTTCTGCTGTGCTTACAAATGCACCGTTTGTGTTGAATCTGGATTGTGACCAATACATCAATAATAGCAAGGCTTTTAGAGAGGCTATGTGCTTTTTAATGGACCCCCAACTTGGAAAGAAGCTCTGTTATGTCCAATTTCCAAGAAGGTTTGATGGCATTGATTCCAGTGATAGATATGCTAATCGCAATACTGTATTCTTTGATATCAACATGAAATGCCTTGATGGGATTCAAGGTCCAGTTTATGTTGGGACTGGATGTGTATTCAACAGGCAGGCATTATATGGCTATAAGCCACCATCTGAGAAAAGGCCAAAGATGAGCTGTTGCAGCTGGTCTTCATTCTGTTGCTGTTGTTCTGGTGACTCTCATTCCACTTTTGATGTTGAAGAGATTGATGAAGGATTTGATGAGCAAGAGGAATCATCCTTAATGTCCCTGAAAATTTTTGAGAAAAGATTTGGACAGTCACCGGTTTTCATTGCTTCTGCTTTGATGGAAGATGGTGGACTCCCAAAAGGCACCAATGCCAGATTACTGATGAAGGAAGCCATTCATGTTATAAGCTGTGGCTATGAAGAGAAAACTGAATGGGGCAAGGAGATTGGGTGGCTTTATGGCTCAGTCACAGAAGACATCTTAACTGGGTTTAACATGCATTGTAGAGGATGGAAATCAGTGTACTGCATGCCTAAGAGAGCAGCTTTTAAAGGATCTGCTCCTATAAATCTATCAGACCGATTACACCAAGTTCTGAAATTGGCTTCAGGTTCTACTGAGATTTTCTTCAGTGGCTATTGCCCACTGTGGTATGGTTATAGCGGAAAACTGAAATGGCTACAGAGGTTGGCTTACACTAATGTCATCGTTTATCCATTCACTTCCATCCCTTTGCTCATATATTGTACAATTCCAGCGGTTTGTCTTCTGACCGGAAAGTTCATCATCCCCACTCTGACAAACTTTGCTAGCATTTGGTTAATGGCTCTATTTATCTCCATCATCTTAACTTGTGTGCTAGAGCTTCGTTGGAGTGGGGTTAGCATTCAGGATTGGTGGCGCAATGAGCAATTTTGGATCATTGGAGGTGTTTCTGCACACCTTTTTGCTGTATTTCAAGGTCTCCTTAAAGTTGGTGGAGTAGACACTCATTTCACAGTGAGAGCAAAATCAGCAGATGACACTGTATTGGGACAACTCTATCTCTTCAAGTGGACTAATCTTCTAATCCCACCAACTAGTCTTGTAATCTTGAATATGGTGGGAATTGTGGCTGGACTCTCTGATGCCCTTAACAATGGCTATGTCTCATGGGGACCCTTGTTTGGGAAGCTTTTTTTCTCCATCTGGGTCATTGTGCACTTATATCCTTTCCTCAAAGGTCTAATGGGAAGGCAAAACAGAACTCCCACCATAGTAGTTCTCTGGTCAACACTCCTAGCGTTAATTTTCTCAATGATTTGGGTGCGAATTGATATTTTCTTGCCCAAACAAACAGGTCCAATACTAAAACAATGTGGGATAGAATGCTAA 2451 0.4268 MSNEQGEDDYLLAEARQPLWRKVPVSSSLINPYRIVIVMRLVILVFFFHFRISTPVHDAMALWIISVVCEIWLALSWMVDQLPKWFPMTRETSLERLSIRFEREGEPNLLAPVDVFVTTADPFKEPPIITANTVLSVLSVDYPVDKVSCYVSDDSASMLLYDTLALTAEFARIWVPFCKKYSIEPRAPESYFSQKVDYLKDKVHPTFVRDRRAMKREYEEFKVKINVLVAKAQKKPEEGWVMQDGNPWPGNESDNHPGMIQVCLGSAGALDNEGKELPRLVYVSREKRPGYQHHRKAGAMNALVRVSAVLTNAPFVLNLDCDQYINNSKAFREAMCFLMDPQLGKKLCYVQFPRRFDGIDSSDRYANRNTVFFDINMKCLDGIQGPVYVGTGCVFNRQALYGYKPPSEKRPKMSCCSWSSFCCCCSGDSHSTFDVEEIDEGFDEQEESSLMSLKIFEKRFGQSPVFIASALMEDGGLPKGTNARLLMKEAIHVISCGYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLKLASGSTEIFFSGYCPLWYGYSGKLKWLQRLAYTNVIVYPFTSIPLLIYCTIPAVCLLTGKFIIPTLTNFASIWLMALFISIILTCVLELRWSGVSIQDWWRNEQFWIIGGVSAHLFAVFQGLLKVGGVDTHFTVRAKSADDTVLGQLYLFKWTNLLIPPTSLVILNMVGIVAGLSDALNNGYVSWGPLFGKLFFSIWVIVHLYPFLKGLMGRQNRTPTIVVLWSTLLALIFSMIWVRIDIFLPKQTGPILKQCGIEC 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi354g00037 816 FunFam Cellulose synthase 230 404 - -
Sebi354g00037 816 Pfam Cellulose synthase 113 808 IPR005150 GO:0016020|GO:0016760|GO:0030244
Sebi354g00037 816 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 16 781 - -
Sebi354g00037 816 SUPERFAMILY Nucleotide-diphospho-sugar transferases 268 634 IPR029044 -
Sebi354g00037 816 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 219 404 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi354g00037 Sebi-Chr354 691369 694827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi354g00037 11 816 Cell Wall Biosynthesis AT5G17420 70.588 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi354g00037 K10999 - gmx:100777278 1484.54