Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi354g00024 ATGAGAGTTGGATTTGAAGTCCTTCATGCAAATCCAAACATGATTCGTCCCCACATGCATGAAACTTGGGACTACCCAAATATTGCTGATTTGCAAGCTCCAATTCCAACCCCATCAAATCAATATCCAAAGCCACCAACTGAAAACCACTACCTAAACTTGGGGCAGAATGAGGTTTGTGATTGGGTTGAACACATTTCCAAACACCTTGTTGAAGACATACCAGAAACCACTTCTGATAATAACAACTTGCTAGCCAATACCCCAATAACAAGAGCTTCCCATGACAACCTTGTTCCCTCACTACTTTCACCCAATTTCAATCCAAGAAAATCCTCCTTCACCAATGACCCCCTAAACAGCAATAATTTCAACCCTCACATTCAATCAAACACCTTAGATTTTGATCATAACAACAATAATGTTTATGATCATGGGTTAAACCTGATAACCCTTCTAATGGAATGTGCAGTAGCAATCTCTGTTGACAACCTTGGTGAGGCTCACAGAATGTTACTAGAGATAACACAAGTAGCCTCTCCTTATAAACCATCATGTGCAGAACGTGTTGTTGCTTATTTTGCAAAGGCCATGACTAGCAGGGGGCTTCAATGGCCACCCTTTTTCCACATACTTGCCACCAGAATGGAGGGTCCACCTGAGGTTAGAATGACAGGCATGGGAACCTCAATGGAACTCCTTGTTGAAACAGGAAAACAGCTCTCCAACTTTGCAAGAAGGTTAGGATTGTCCTTCAAGTTCAACCCTGTTGCAACCAAGTTTGGGGAAATTGATGTTTCCATGGTGCAAGTGAGGCATGGTGAGACACTTGCAGTGCATTGGTTGCAGCATTCTTTGTATGATGCAACTGGACCTGATTGGAAAACATTGAGGCTTCTTGAGGAGTTGGAGCCAAAAATCATAACTTTGGTAGAACAAGATGTGAACCATGGAGGGTCTTTCTTGGACCGTTTTGTTGGCTCTTTGCACTATTACTCTACCCTTTTTGATTCTCTTGGAGCATATTTGCATAGTGATGATTCTAGCAGGCAAAGTGTGGAGCATGGCCTTCTCTCTAAGGAGATCAACAATATATTAGCCATAGGAGGCCCTGCAAGGAGTGGAGAGGACAAGTTTAGGCAGTGGAGAAGTGAGCTTGCAAGACATTGTTTTGTGCAGGTTCCAATGAGTGCAAATTCAATGGCACAAGCACAGTTGATATTGAACATGTTTTCACCAGCTCATGGGTATAGCCTTGCACAAGTTGATGGCACATTAAGGCTTGGATGGAAGGATACAAGTTTGTATACAGCTTCTGCATGGACCTCTAGTACTTCTAGGTAG 1344 0.4278 MRVGFEVLHANPNMIRPHMHETWDYPNIADLQAPIPTPSNQYPKPPTENHYLNLGQNEVCDWVEHISKHLVEDIPETTSDNNNLLANTPITRASHDNLVPSLLSPNFNPRKSSFTNDPLNSNNFNPHIQSNTLDFDHNNNNVYDHGLNLITLLMECAVAISVDNLGEAHRMLLEITQVASPYKPSCAERVVAYFAKAMTSRGLQWPPFFHILATRMEGPPEVRMTGMGTSMELLVETGKQLSNFARRLGLSFKFNPVATKFGEIDVSMVQVRHGETLAVHWLQHSLYDATGPDWKTLRLLEELEPKIITLVEQDVNHGGSFLDRFVGSLHYYSTLFDSLGAYLHSDDSSRQSVEHGLLSKEINNILAIGGPARSGEDKFRQWRSELARHCFVQVPMSANSMAQAQLILNMFSPAHGYSLAQVDGTLRLGWKDTSLYTASAWTSSTSR 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi354g00024 447 ProSiteProfiles GRAS family profile. 140 442 IPR005202 -
Sebi354g00024 447 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 151 199 IPR005202 -
Sebi354g00024 447 Pfam GRAS domain family 200 442 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi354g00024 Sebi-Chr354 487697 489226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi354g00024 201 442 GRAS Transcription Factor Family AT3G54220 57.851 1.48e-93 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi354g00024 GRAS 5.9e-68 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi354g00024 - - vvi:100263529 495.738