Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi354g00008 ATGGGAAGAGCTCCTTGCTGCGAGAAAACGGGGCTGAAGAAAGGGCCATGGACTCCAGAGGAAGATCTCATCCTCATCAATCATATCAACACATATGGCCACAAAAATTGGCGTGCCTTGCCCAAACAAGCCGTTGAACCACAGAAATCTCTACCTACACATTATTGTTTCGGATGGTCAGCTATTGCAGCAAGATTGCCGGGGCGCACAGATAACGAGATAAAGAATGTGTGGCACACTCACTTGAAGAAGAAGAGGCTGCCAAATGCAAAACAAATGCCGTCGCCCCAAAAGTTCAAGTTCAATATACAAGAACCCGTGATCAATTTTCCCACTCTCATCAAAGCCGAAAGAACAGAGGAAAGGCCACTATCTCCTCCACACTGTTCGAGTACCCTCACCACTAGTGAAAGCAGTGAACACAACGTTAACAGTAGCTTAGTTACTAGTACTATTAAATGTCACATGGCCATCAATAACACTAGTACTGATGAATCCCTATTATATGATGATTTCTGGTCTCAAGTTTTTTCAGCTGATAATTCCGTTGAGATAAGCAGTTTTCCCAAGTTTCAATTTCCATTATTGACCGAAGAAGGGGTCCATCTTGCTATTAGTTCATCATCTAGCACGGACTTTTGGTATGATGTTTACATGACAGCTGAGGAACTGCCAGAATTCTTATAA 687 0.4294 MGRAPCCEKTGLKKGPWTPEEDLILINHINTYGHKNWRALPKQAVEPQKSLPTHYCFGWSAIAARLPGRTDNEIKNVWHTHLKKKRLPNAKQMPSPQKFKFNIQEPVINFPTLIKAERTEERPLSPPHCSSTLTTSESSEHNVNSSLVTSTIKCHMAINNTSTDESLLYDDFWSQVFSADNSVEISSFPKFQFPLLTEEGVHLAISSSSSTDFWYDVYMTAEELPEFL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi354g00008 228 ProSiteProfiles Myb-like domain profile. 9 82 IPR001005 -
Sebi354g00008 228 Gene3D - 11 86 - -
Sebi354g00008 228 CDD SANT 16 82 IPR001005 -
Sebi354g00008 228 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 44 - -
Sebi354g00008 228 Pfam Myb-like DNA-binding domain 14 82 IPR001005 -
Sebi354g00008 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 86 IPR017930 -
Sebi354g00008 228 SMART sant 13 84 IPR001005 -
Sebi354g00008 228 MobiDBLite consensus disorder prediction 125 140 - -
Sebi354g00008 228 MobiDBLite consensus disorder prediction 119 140 - -
Sebi354g00008 228 SUPERFAMILY Homeodomain-like 11 78 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi354g00008 Sebi-Chr354 164639 166633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi354g00008 1 227 MYB Transcription Factor Family AT2G31180 36.015 6.38e-42 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi354g00008 Myb_DNA-binding 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi354g00008 K09422 - gmx:100802214 191.43