Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00080 ATGGGGCCACCTTACTCCTTCGTTTCTGGCTCTCTCCCTGAAATCAAAACAATGATGAAGGATGCAAGGAAAAGGGTCATGGATAGTCACTCACATGATGTTACTCAAAGGGTCCTTCCTCATCTCCATAAATGGTCCTCATTATATGGGCACACATTTCTGTATTGGTATGGAACACAAGCGAGGATTTGTATCCCTGATCCTGAGCTGGCGAAGGAGATTTTATCAAACAAGTTTGGTTTCTATGCAAAATCTAAGACAAGGCCTTCTATAAAAGCCATGATAGGAGAAGGGTTAGTGTTAGTCAATGGAGTGGAGTGGGTTAAGCGCAGAAGGATATTGAATCCAGCCTTCTCCATGGATAAACTTAAGGTTATGATCAGTAGGATGGCAGCATGTACCATTTCCATGGTGGACAAGTGGAAAAGTGAAGCTATTGAAGCCAAGACAATAGAGATGAATGAACAATTTCGACAGCTATCAGCAGATATCATCGCCCAAACTGCCTTCGGTACCAGTTTTCTCCAAGGAAGGGAGGCCTTTAATGCACAAACAGAGCTTCAGAAGTGTATTGTAGCTTCAAGTTCTGACATTTTCATTCCTGGCACCCAATATCTTCCTACTAAGTCAAATTTACATAAATGGAAGCTTGACAGGAAAATGAAGAAATCACTACAGCTCATTATAGAAAGTAGATTGCATTCTCAATCAAGTAGTGTTGGTGGATCATCAGATTGCTCTTTTGGGGATGATCTACTAGGTATAATGATGGATACAGAAAACACAAATACTGGTCCTAAATTGAAGATGAAGGAGATCATGGAAGAATGCAAGACCTTTTTCTTTGCTGGTCATGAAACCACTTCAAATTTGCTTACTTGGACTGTCTTCTTGTTGAGTGCACACAAAGAATGGCAAGAGAAACTCAGACAAGAGGTCTTGCAAAATTGTGGCATGGAAATTCCTGATGCAGATATGTTATCAAAGTTAAAATTGGTGAATATGGTATTGCTGGAAGCATTAAGGTTATATTGTCCTGTGATAGAACTAATAAGAGAGGCTTCACAAGACATGAAATTGGGAAATTTGTTGATCCCAAAAGGAACATGTCTCACAATCCCAATCACAATGATTCACAGGAGCAAAGAATACTGGGGTGAAGATGCAAATGAATTCAATCCACTGAGATTCATAAATGGAGTTTCTAAGGCTGCAAAGCACCCAAATGCTCTTCTTGCCTTTTCGGTGGGTCCAAGAAATTGCATTGGTCAAAATTTTGCTATGCTGGAAGCAAAGACAGTAATGGCTTTAATTCTGCAAAGGTTTTCTTTGTCCCTTTCCCCTGATTATGTACATGCACCTGCAAACAACCTCACTTTGCAGCCACAACATGGCCTTCCCATCATTGTAAAACCTTTGCAATTGTAA 1428 0.402 MGPPYSFVSGSLPEIKTMMKDARKRVMDSHSHDVTQRVLPHLHKWSSLYGHTFLYWYGTQARICIPDPELAKEILSNKFGFYAKSKTRPSIKAMIGEGLVLVNGVEWVKRRRILNPAFSMDKLKVMISRMAACTISMVDKWKSEAIEAKTIEMNEQFRQLSADIIAQTAFGTSFLQGREAFNAQTELQKCIVASSSDIFIPGTQYLPTKSNLHKWKLDRKMKKSLQLIIESRLHSQSSSVGGSSDCSFGDDLLGIMMDTENTNTGPKLKMKEIMEECKTFFFAGHETTSNLLTWTVFLLSAHKEWQEKLRQEVLQNCGMEIPDADMLSKLKLVNMVLLEALRLYCPVIELIREASQDMKLGNLLIPKGTCLTIPITMIHRSKEYWGEDANEFNPLRFINGVSKAAKHPNALLAFSVGPRNCIGQNFAMLEAKTVMALILQRFSLSLSPDYVHAPANNLTLQPQHGLPIIVKPLQL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00080 475 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi353g00080 475 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi353g00080 475 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi353g00080 475 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi353g00080 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Sebi353g00080 475 Pfam Cytochrome P450 42 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi353g00080 475 SUPERFAMILY Cytochrome P450 35 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi353g00080 475 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 465 - -
Sebi353g00080 475 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi353g00080 475 PRINTS E-class P450 group I signature 160 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi353g00080 475 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi353g00080 475 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi353g00080 475 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi353g00080 475 PRINTS E-class P450 group I signature 46 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi353g00080 475 Gene3D Cytochrome P450 26 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00080 Sebi-Chr353 994231 998603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00080 2 474 Cytochrome P450 AT2G46960 54.244 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00080 K20660 - aprc:113872106 755.362