Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00075 ATGGGCAAAGGCAAAGCCTCTAGTTCTTCCTCCTCATCTATCAGCAGCAGCAGAAAGCCTGTTATCTCAACTGCATCCTCTCTTACACAACAAAATACTGAAGACCTTCATACAGATCTTAGGCTTGGACTAAGCATTTCTGCCACTCAACATCTTGGCCCTTCAACTTCAAGGGGGTATTGGCAACCAACATATCTAAGTGGTTCACAAGGTGCTGAAGTGAATGATTGCAGCGATCATAACAGCTTCTTTGTGAAGGTCTACATGGAAGGCATTCCAATTGGAAGAAAACTCAACTTGTTAGCTCATGATGGCTACCAAGAGTTAGTAAAGACCCTTGAACAAATGTTTGACACTACCATTCTCTGGGGAACTGAGATGGATGGAGTGCAATCTGAGAGATGTCATGTGCTAACTTATGAAGATGGAGAAGGAGACTTGATTATGGTTGGGGACGTGCCTTGGGAGATGTTCTTATCAACTGTGAAGAGGTTGAAGATCACTAGGGTCGACACATTCGGGTGTTAA 528 0.4375 MGKGKASSSSSSSISSSRKPVISTASSLTQQNTEDLHTDLRLGLSISATQHLGPSTSRGYWQPTYLSGSQGAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLAHDGYQELVKTLEQMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEMFLSTVKRLKITRVDTFGC 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00075 175 Gene3D - 76 174 - -
Sebi353g00075 175 Pfam AUX/IAA family 73 169 IPR033389 -
Sebi353g00075 175 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 61 170 IPR003311 GO:0005634|GO:0006355
Sebi353g00075 175 MobiDBLite consensus disorder prediction 1 30 - -
Sebi353g00075 175 SUPERFAMILY CAD & PB1 domains 78 167 - -
Sebi353g00075 175 ProSiteProfiles PB1 domain profile. 82 172 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00075 Sebi-Chr353 955917 956812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00075 86 167 B3 DNA Binding Superfamily AT4G23980 37.805 3.17e-13 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Sebi353g00075 AUX_IAA 1.9e-29 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00075 K14484 - gmx:100781660 268.855