Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00073 ATGGAACAGAAGGTGGAGACAAATGGGGTGAAGTCGGGTCAACAATTTCTGGACCCACGGCCATGCACCAAATTAGACGCTAATGTTGGATCAGTTACTGATGATAAGACTTGTCAAGAGGTATCGGTCCCTCCCTCAAAGCAAAGTGACCACCAATCCAATATTGGAAAGCAGGCTTGTCCTCCTGCAGAAGAATCATCCTCACTGAGTTGGGACTCATCCAAGTTACAAGAATCCAAAATTCCTTTCCGAAAAACCAGGGTTTCCGTTCGTGCAAGATCCGAAGCTCCTCTGATTAACGATGGATGTCAGTGGAGGAAATATGGGCAAAAATTGGCCAAGGGTAACCCTTGTCCTCGTGCCTATTATCGCTGTACCATGGCTGCAGGATGCCCGGTTCGTAAGCAGGTGCAAAGATGTGCAGATGACAAAACGGTTTTAATAACAACTTATGAAGGGAATCATAACCACCCTCTCCCACCAGCAGCAACTGCCATGGCCAATTCTACATCAGCAGCTGCGGCCATGCTGCTATCCGGTTCAGCTGGCCACCCTGTTATCTTCCCTCAGAAGCTTCCACCTCCGCCACTAATGCAACGACAACCTTCCTCTATGGTGGATACTGTCACTGCAGCTATTGCTTCCGATCCAAACTTCACTGCTGTGCTGGCAGCTGCAATCTCATCCTTTATTGGACCACCAAGAGGAAGCAGTGATGGAAATAACAACAATGGCGGAAGGTCCATGCAACTTCCGCAACCATGCACACTGCATATCACGTCACCAACTAGCTAG 795 0.4868 MEQKVETNGVKSGQQFLDPRPCTKLDANVGSVTDDKTCQEVSVPPSKQSDHQSNIGKQACPPAEESSSLSWDSSKLQESKIPFRKTRVSVRARSEAPLINDGCQWRKYGQKLAKGNPCPRAYYRCTMAAGCPVRKQVQRCADDKTVLITTYEGNHNHPLPPAATAMANSTSAAAAMLLSGSAGHPVIFPQKLPPPPLMQRQPSSMVDTVTAAIASDPNFTAVLAAAISSFIGPPRGSSDGNNNNGGRSMQLPQPCTLHITSPTS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00073 264 Gene3D WRKY domain 84 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi353g00073 264 ProSiteProfiles WRKY domain profile. 94 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi353g00073 264 MobiDBLite consensus disorder prediction 234 264 - -
Sebi353g00073 264 FunFam probable WRKY transcription factor 31 84 161 - -
Sebi353g00073 264 SUPERFAMILY WRKY DNA-binding domain 92 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi353g00073 264 MobiDBLite consensus disorder prediction 231 264 - -
Sebi353g00073 264 MobiDBLite consensus disorder prediction 1 76 - -
Sebi353g00073 264 SMART WRKY_cls 99 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi353g00073 264 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 7 243 IPR044810 GO:0003700
Sebi353g00073 264 MobiDBLite consensus disorder prediction 30 76 - -
Sebi353g00073 264 Pfam WRKY DNA -binding domain 100 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00073 Sebi-Chr353 921062 922242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00073 83 181 WRKY Transcription Factor Family AT4G04450 83.838 8.21e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi353g00073 WRKY 4.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00073 - - vun:114192179 244.202