Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00069 ATGGCTGTTGGAACCATCGGTGCCATTGGAAATGGTTTGGGTTTGCCTCTCATGACATTACTGTTCGGTGAGATGATTGATAGTTTTGGAAGTAACCAACAAAGCACAGATGTAGTTGAACAAGTATCCAAGGTCTCTCTGAAATTTGTATATTTGGCAGTAGGAAGTGGGTTGGCAGCATTTCTCCAGGTGGCTTGCTGGATGGTAACAGGGGAAAGACAAGCTGCAAGAATAAGGGGATTGTATTTGAAAACTATATTAAGACAAGATGTTGCTTTTTTTGATAAAGAAACAAACACAGGAGAGGTGGTAGGGAGAATGTCAGGTGACACAGTTCTCATACAAGATGCCATGGGTTGGGAAATTTCTGCAGCTAATAGCAACATTCATTGGGGGCTTCGTGATAGCCTTTGTGAAAGGGTGGCTTCTAACTGTTGTCATGTTGTCCACTCTTCCACTTCTTGTTGTGTCAGGTGCTGCCATGGCCTTCATCATAGGCAGGATGGCTTCCAGAGGTCAAACTGCTTATGCAAAGCTGCACATGTAGTTGAACAGACAATTGGCTCAATAAGAACTGTTGCTTCCTTTACTGGGGAAAAGCAAGCAGTTTCTAGTTATAGCAAATTTCTTGTGGATGCTTACAAATCAGGAGTTCATGAAGGTTCCATAGCTGGAGTAGGCCTAGGCACAGTTATGTTTGTTATTTTCTGTGGTTATGCTTTGGCTGTATGGTTTGGCGCAAAGATGATAATGGAAAAAGGATATAATGGGGGAATAGTGATTAATGTGATCATTGCTGTGTTAACTGCTTCCATGTCTCTTGGCCAAGCATCTCCTAGCATGAGTGCTTTTGCTGCGGGTCAGGCTGCAGCTTACAAAATGTTTCAAACAATTGAGAGGAAGCCAGAGATAGATGCTTATGATCCAAATGGAAAAATATTAGAGGATATTCAAGGTGAAATAGAGTTAAGGGATGTTTATTTCAGTTATCCAGCCAGACCTGAGGAGCTGATATTCAATGGATTCTCTCTTCATATACCTAGTGGTACAACTGCAGCATTAGTTGGACAAAGTGGAAGTGGAAAGTCTACAGTTATCAGTTTGGTAGAAAGATTCTACGATCCACAGGAAGGTGAAGTTCTTATTGATGGCATTAACTTGAAAGAATTTCAGCTTAGGTGGATCAGAGAAAAAATTGGCCTTGTCAGTCAAGAACCAGTGTTGTTTGCATCTAGCATTAAGGATAACATTGCATATGGAAAGGAAGGAGCAACTATTGAAGAGATAAGATCAGCATCTGAACTTGCAAATGCTGCTAAATTCATTGATAAACTTCCACAGGGATTGGACACAATGGTTGGGGAGCATGGTACTCAGCTATCTGGTGGGCAGAAGCAGCGTATAGCCATTGCAAGAGCAATCCTAAAAGATCCAAGAATTCTACTTCTAGATGAAGCTACAAGTGCACTTGATGCAGAATCAGAAAGGATAGTGCAAGAGGCTCTAGACAGGATCATGGTCAATAGAACTACAGTTGTTGTGGCACATCGTTTGAGCACAGTTAGGAATGCTGACATGATTGCTGTAATTCATAGAGGGAAGATGGTTGAGAAAGGAACACACTCAGAATTACTCAAGGATCCTGAGGGAGCTTACTCTCAACTTATACGCCTACAAGAAGTAAACAAGGAATCAGAAGAAACTGCAGAACATCACAACAAGAGTGAAGTTTCTATAGAATCCTTCAGACAATCAAGTCAAAGGAGGTCACTTCAAAGATCTATTAGCAGGGGATCATCTTTAGGGAATAGTAGCCGCCATTCATTTTCAGTTTCATTTGGTTTACCCACAGGAGTTAATGTCCCTGACCATGAACGTGAAAACTTACAACCCAAGGAACAACCACAAGAGGTTCCATTACGCCGCCTTGCTTCCCTCAACAAGCCAGAGATTCCAGTTCTTCTAATTGGATGTTTAGCTGCCATAGGAAATGGTGTTATACTTCCAATATTTGGTGTTTTGATATCCAGTGTCATCAAAACATTTTATGAACCATTTGATGAGATGAAAAAAGATGCCAGGTTTTGGGCACTAATGTTTATGATCCTTGGTCTTGCATCGTTACTAGTGATTCCAGCTAGAGCATACTTTTTCTCTGTTGCTGGATGCAAGTTAATCCAACGTATTAGGCTAATATGTTTTGAGAAAGTGGTGAACATGGAGGTTGGTTGGTTTGATGAGCCTGAGAACTCAAGTGGTGCTGTTGGTGCAAGGCTTTCAGCAGATGCTGCTTCTGTACGTGCCCTTGTTGGTGATGCACTTGGACTATTAGTCCAAAATCTAGCATCTGCATTGGCAGGTTTGATTATTGCTTTTATAGCAAGTTGGCAGCTGGCGTTGATTATTCTTGTCTTGATTCCCTTGATTGGATTAAATGGTTATGTTCAAATGAAATTCATGAAGGGATTCAGTGCAGATGCAAAGATGATGTATGAGGAAGCTAGCCAAGTTGCTAATGATGCAGTTGGAAGCATAAGAACAGTAGCTTCTTTCTGTGCTGAAGATAAGGTTATGGAACTATACAGGAAGAAATGTGAAGGCCCCATGAAAACAGGGATAAGGCAAGGGTTAATCAGTGGATCAGGATTTGGGATTTCATTTTTCTTACTGTTTTGTGTCTATGCAACTAGTTTCTATGCAGGAGCTAGACTTGTGGATGCTGGCAAGGCATCATTCTCAGATGTTTTCCGGGTTTTCTTTGCTTTAACTATGGCAGCTATTGGAGTTTCTCAATCAAGCTCCTTTGCTCCTGACTCTAGCAAAGCCAAGTCAGCTACTGCTTCCATATTTGGAATAATTGATAAGAAGTCAAAGATAAATCCAAGTGATGAGTCTGGCACCACACTGGATACTGTTAAGGGGGATATTGAACTTCGTCATGTGAGTTTCAAGTATCCATCTAGGCCTGATATACAAATTTTCAGAGACCTCAACTTGGCTATCCATTCTGGCAAGACAGTGGCCCTTGTTGGTGAAAGTGGAAGTGGGAAATCCACAGTGATTGCCTTGTTGCAAAGATTTTATGATCCTGATTCAGGTGAAATCACACTTGATGGGATAGAAATTAGGCAGTTACAACTCAAGTGGTTAAGGCAACAAATGGGTCTTGTAAGCCAAGAGCCAGTGTTATTCAATGACACTATCCGTGCCAATATTGCTTATGGAAAGGGAGGCAATGCAACTGAAGCAGAAATCATAGATGCAGCAGAATTGGCCAATGCACATAGGTTCATTAGTGGCTTACAACAGGGTTATGATACTATAGTGGGAGAGAGGGGAACCCAATTATCTGGTGGACAAAAGCAAAGGGTAGCCATTGCACGTGCTATAATCAAAAGTCCAAAGATATTGCTATTAGACGAGGCCACAAGTGCATTAGACGCTGAGTCAGAGAGGGTTGTGCAAGATGCATTAGACAGAGTTATGGTAAATAGGACCACTGTGGTTGTGGCGCATCGTCTATCTACAATAAAAAATGCTGATGTGATTGCTGTTGTGAAAAATGGAGTTATAGTGGAGAAAGGAAGGCATGAAACTCTCATTAACATAAAGGATGGGTTTTATGCTTCCTTAGTCCAACTTCACACAAGTGCTTCCACAGTGTACGAACTATTAGCAACTCCTAAAGAAAAGCACTAA 3699 0.4136 MAVGTIGAIGNGLGLPLMTLLFGEMIDSFGSNQQSTDVVEQVSKVSLKFVYLAVGSGLAAFLQVACWMVTGERQAARIRGLYLKTILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAMGWEISAANSNIHWGLRDSLCERVASNCCHVVHSSTSCCVRCCHGLHHRQDGFQRSNCLCKAAHVVEQTIGSIRTVASFTGEKQAVSSYSKFLVDAYKSGVHEGSIAGVGLGTVMFVIFCGYALAVWFGAKMIMEKGYNGGIVINVIIAVLTASMSLGQASPSMSAFAAGQAAAYKMFQTIERKPEIDAYDPNGKILEDIQGEIELRDVYFSYPARPEELIFNGFSLHIPSGTTAALVGQSGSGKSTVISLVERFYDPQEGEVLIDGINLKEFQLRWIREKIGLVSQEPVLFASSIKDNIAYGKEGATIEEIRSASELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHRGKMVEKGTHSELLKDPEGAYSQLIRLQEVNKESEETAEHHNKSEVSIESFRQSSQRRSLQRSISRGSSLGNSSRHSFSVSFGLPTGVNVPDHERENLQPKEQPQEVPLRRLASLNKPEIPVLLIGCLAAIGNGVILPIFGVLISSVIKTFYEPFDEMKKDARFWALMFMILGLASLLVIPARAYFFSVAGCKLIQRIRLICFEKVVNMEVGWFDEPENSSGAVGARLSADAASVRALVGDALGLLVQNLASALAGLIIAFIASWQLALIILVLIPLIGLNGYVQMKFMKGFSADAKMMYEEASQVANDAVGSIRTVASFCAEDKVMELYRKKCEGPMKTGIRQGLISGSGFGISFFLLFCVYATSFYAGARLVDAGKASFSDVFRVFFALTMAAIGVSQSSSFAPDSSKAKSATASIFGIIDKKSKINPSDESGTTLDTVKGDIELRHVSFKYPSRPDIQIFRDLNLAIHSGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGIEIRQLQLKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGNATEAEIIDAAELANAHRFISGLQQGYDTIVGERGTQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINIKDGFYASLVQLHTSASTVYELLATPKEKH 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00069 1232 FunFam ABC transporter B family member 9 943 965 - -
Sebi353g00069 1232 Gene3D ABC transporter type 1, transmembrane domain 634 942 IPR036640 GO:0005524|GO:0016020
Sebi353g00069 1232 CDD ABC_MTABC3_MDL1_MDL2 321 559 - -
Sebi353g00069 1232 Gene3D ABC transporter type 1, transmembrane domain 943 1220 IPR036640 GO:0005524|GO:0016020
Sebi353g00069 1232 Pfam ABC transporter 340 488 IPR003439 GO:0005524
Sebi353g00069 1232 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 282 - -
Sebi353g00069 1232 CDD ABC_MTABC3_MDL1_MDL2 976 1214 - -
Sebi353g00069 1232 ProSitePatterns ABC transporters family signature. 1116 1130 IPR017871 GO:0005524|GO:0016887
Sebi353g00069 1232 SMART AAA_5 1003 1196 IPR003593 GO:0016887
Sebi353g00069 1232 SMART AAA_5 348 534 IPR003593 GO:0016887
Sebi353g00069 1232 Gene3D - 311 560 IPR027417 -
Sebi353g00069 1232 Gene3D - 966 1216 IPR027417 -
Sebi353g00069 1232 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 655 941 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi353g00069 1232 FunFam ABC transporter B family member 1 311 560 - -
Sebi353g00069 1232 ProSitePatterns ABC transporters family signature. 460 474 IPR017871 GO:0005524|GO:0016887
Sebi353g00069 1232 MobiDBLite consensus disorder prediction 562 608 - -
Sebi353g00069 1232 MobiDBLite consensus disorder prediction 579 608 - -
Sebi353g00069 1232 Gene3D ABC transporter type 1, transmembrane domain 1 578 IPR036640 GO:0005524|GO:0016020
Sebi353g00069 1232 MobiDBLite consensus disorder prediction 562 578 - -
Sebi353g00069 1232 Pfam ABC transporter 995 1144 IPR003439 GO:0005524
Sebi353g00069 1232 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 2 286 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi353g00069 1232 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 976 1213 IPR003439 GO:0005524
Sebi353g00069 1232 Pfam ABC transporter transmembrane region 2 123 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi353g00069 1232 Pfam ABC transporter transmembrane region 654 926 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi353g00069 1232 Pfam ABC transporter transmembrane region 178 272 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi353g00069 1232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 310 559 IPR027417 -
Sebi353g00069 1232 SUPERFAMILY ABC transporter transmembrane region 2 122 IPR036640 GO:0005524|GO:0016020
Sebi353g00069 1232 FunFam ABC transporter B family member 1 634 942 - -
Sebi353g00069 1232 PANTHER ABC TRANSPORTER B FAMILY 1 561 IPR039421 -
Sebi353g00069 1232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 966 1214 IPR027417 -
Sebi353g00069 1232 SUPERFAMILY ABC transporter transmembrane region 178 305 IPR036640 GO:0005524|GO:0016020
Sebi353g00069 1232 FunFam ABC transporter B family member 1 966 1216 - -
Sebi353g00069 1232 CDD ABC_6TM_Pgp_ABCB1_D2_like 644 959 - -
Sebi353g00069 1232 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 321 557 IPR003439 GO:0005524
Sebi353g00069 1232 SUPERFAMILY ABC transporter transmembrane region 635 955 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00069 Sebi-Chr353 846389 855145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00069 656 1218 Calmodulin-binding Proteins AT2G36910 40.741 1.37e-129 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00069 K05658 - gmx:100800034 1998.79