Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00058 ATGGAAAGCGTTATCAAAGCCTTCAACATGAGCGATAGGCTCACCGTGGAACATGGAGACAACAACCCTGGCATTAAGATGGCACTTGAAGATTGCAAGGACTTATTGCAATCTGCCATTCAGGAACTCCAAGCCTCAGGTGTTTTGGTTCAAGAAAGCAACCTTCAAGATATCAACCAACGCGCAGCTGAACTTAAAAACTGGCTAGGTGCTGTTGTTGCCTACCAACAATCTTGCCTTGATGGGTTTAACACAGACGGTGAGAAGGAGGTTCAAACCAAGTTACAATCAGGTAGCTTGGACAATGTTGGAAAACTCACTGGCTTGGCACTTGATATTGTGTCTGGTATCACTAAGATCCTTAGTGCTGTTGATTTGAATTTGGCTCTAAAACCCGCTTCTCGTCGTCTTCTTGAGGTCGATCATGAGGGTTACCCAACTTGGTTCTCTGCTTCCGATCGTAAACTCTTGGAGATGATCAGCCAAGGAGTAGGAGGAGCAAATTCAGGCCACAGCACTGGTGGAGGACTTATGCCCAATGCAATTGTCGCTAAGGATGGTAGTGGCCAATTCAAAACTATTTTGGATGCTATTAACTCTTACCCCAAAAACCACCAAGGCAGGTTCATTATTTACGTCAAGGCTGGTATCTATGATGAGTACATTCTCGTTGACAAGAAGAAGCCCAACATTCTCTTGTACGGTGATGGCCCTACCAAGACCATTATTACTGGACGCAAAAACTTCCACGAAGGTGTTAAGACCATGAGAACCGCCACCTTCTCCACTGTTGCTGATGATTTCATTGCCAAGTCAATTGCATTTGAGAACACTGCTGGTGCTGAAGGCCACCAAGCAGTGCACTCCGTGTGCAGGGTGATCGCTCTGCATTCTTTGATTGTGCTCTTCGTGGTTACCAAGACACCTTGTATGCTCATGCTCACCGTCAATATTACCGTAACTAACTCCAAGATCCTGTTGAGGAAGCCTGGTCCAAACCAACAGAACATTGTGGTGGCTGATGGAACAGATCAGAAGAGCATGCCTACTGGAATTGTCCTTCAGAACTGTGAGATCATGCCATCTCCTGAACTCATGGCTGACAGCCAGATGGATACATTCCTTGGAATCCAATTGAACCAAAACACACAAAATGCTTACTTCGCTGAGTTTGCCAACACGGGACCTGGTGCCAATGCTCAAGCAAGAGCTAAATGGGGAAAAGGTCTCATTAGCAAGGATTGA 1245 0.4586 MESVIKAFNMSDRLTVEHGDNNPGIKMALEDCKDLLQSAIQELQASGVLVQESNLQDINQRAAELKNWLGAVVAYQQSCLDGFNTDGEKEVQTKLQSGSLDNVGKLTGLALDIVSGITKILSAVDLNLALKPASRRLLEVDHEGYPTWFSASDRKLLEMISQGVGGANSGHSTGGGLMPNAIVAKDGSGQFKTILDAINSYPKNHQGRFIIYVKAGIYDEYILVDKKKPNILLYGDGPTKTIITGRKNFHEGVKTMRTATFSTVADDFIAKSIAFENTAGAEGHQAVHSVCRVIALHSLIVLFVVTKTPCMLMLTVNITVTNSKILLRKPGPNQQNIVVADGTDQKSMPTGIVLQNCEIMPSPELMADSQMDTFLGIQLNQNTQNAYFAEFANTGPGANAQARAKWGKGLISKD 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00058 414 Pfam Pectinesterase 320 376 IPR000070 GO:0030599|GO:0042545
Sebi353g00058 414 Pfam Pectinesterase 180 288 IPR000070 GO:0030599|GO:0042545
Sebi353g00058 414 CDD PMEI-like_3 1 119 - -
Sebi353g00058 414 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 117 IPR035513 -
Sebi353g00058 414 SUPERFAMILY Pectin lyase-like 180 407 IPR011050 -
Sebi353g00058 414 PANTHER PECTINESTERASE 7 407 - -
Sebi353g00058 414 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 7 117 IPR035513 -
Sebi353g00058 414 Gene3D - 314 414 IPR012334 -
Sebi353g00058 414 Gene3D - 176 295 IPR012334 -
Sebi353g00058 414 Pfam Plant invertase/pectin methylesterase inhibitor 6 113 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00058 Sebi-Chr353 719398 720947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00058 1 414 Carbohydrate Esterase AT2G26450 32.692 1.85e-65 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00058 K01051 - gmx:100808559 549.28