Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00053 ATGTGTGAGACAACTGAAGACCCCAAACTTTGTCATGATACACTTAGCACTGTTCCTGCCTCCAATGCCTCTGATCCAAAGGCTTATATAGCAGCAGCAGTGGAAGCAGGGGTCAACATTGTCATCAAGGCCTTCAACATGAGTGACAGGCTCTCAGTAGAGCATGGTGAAAAGAACAACAACACAGGTGGTCTCAAGATGGCTCTTGATGACTGTAAGGACTTAATGGAATTTGCTATGGACAGCATTGAGTCTGCAATTAATTTGGTTCGTGAAAGCAACATACAATCAATTCATGACAGAACCCCTGACTTTAGGAACTGGTTGAGTGCTATTATCTCATACCAACAATCATGCATGGAAGGTTTTGACAAAGAGAAAGATGGTGAAGAACAGGTGAAGGAACAGTTGAATGAGTCAAGTTTGGACACAATGGGGAAGCTCACTGCAATAGTCCTTGACATTGTTACTGATTTGGCTAAAATCCTTCAGAGCTTTAATTTAAAGTTGGATTTAAATCCTGCTTCTCGTCGTCTTCTGGAGGTTGATAGTGAAGGATATCCCACATGGTTCTCAGCTACAGATCGCAGACTCTTAGCTAAGATGAAAGATGGAGAACAAGTAACACCAAATGCTGTGGTTGCCAAAGATGGAAGTGGTCAATTTAAAACCGTTAAGGATGCTATTGCCTCCTATCCAAAGGGCTTCAAAGGCAGATACATTATCTATGTCAAGGCTGGAACCTATGATGAGTACATCACAGTTCCCAAAAAAACAGCTAACCTTCTTATCTATGGTGATGGCCCTACAAAAACCATTATCACTGGTCATAAAAACTATGTTGATGGTGTCAAGACAATGCAAACTGCCACCTTCGCTAACACTGCACCTGGATTCATTGCTAAGTCAATAGCATTTGAGAACACAGCTGGTGCTAGTAAGCATCAAGCAGTGGCATTTAGAAACCAGGGAGATATGTCAGCTATGTTCGATTGTGCTTTTCATGCTTACCAGGACACTCTGTATGTTCATGCGAATCGTCAATTCTACCGCAACTGTGAAATCTCTGGAACCATTGATTTCATCTTCGGTGCATCAGCAACACTGATCCAGAATTCTAAAATCATTGTGAGGAAGCCAGGGGAAAGTCAATTCAACACAGTGACAGCAGATGGTACAAAACAGAAGAACATGGCTACAGGGATTGTGCTCCAGAATTGCGAGATAGTGCCAGAGCAGGCGTTGTTCCCTGATAGGTTTCAAGTGAAATCGTACTTGGGAAGGCCATGGAAGCAATATGCTAGAACAGTGGTTATGGAGTCTAACATTGGTGACTTTATTCAACCAGAAGGGTGGCATGTTTGGGAAGGGGAACAGTTTCTTGACACATTGTACTATGCTGAGTATGCCAACGTTGGACCTGGTGCTGATGTTAAAGGAAGGGTCAAGTGGAAAGGTTACCACCCAAATATCAATAAGGATGAAGCTGCACAATTCACTGCTAGCCAATTCCTCAGAGGTGGACCTTCTGGGAAAGCTGAGGATTGGTTGCAAGCTACTGGTATTCCTTTCAATGCTGGCTTCATCAAGGGTAATTGA 1599 0.4303 MCETTEDPKLCHDTLSTVPASNASDPKAYIAAAVEAGVNIVIKAFNMSDRLSVEHGEKNNNTGGLKMALDDCKDLMEFAMDSIESAINLVRESNIQSIHDRTPDFRNWLSAIISYQQSCMEGFDKEKDGEEQVKEQLNESSLDTMGKLTAIVLDIVTDLAKILQSFNLKLDLNPASRRLLEVDSEGYPTWFSATDRRLLAKMKDGEQVTPNAVVAKDGSGQFKTVKDAIASYPKGFKGRYIIYVKAGTYDEYITVPKKTANLLIYGDGPTKTIITGHKNYVDGVKTMQTATFANTAPGFIAKSIAFENTAGASKHQAVAFRNQGDMSAMFDCAFHAYQDTLYVHANRQFYRNCEISGTIDFIFGASATLIQNSKIIVRKPGESQFNTVTADGTKQKNMATGIVLQNCEIVPEQALFPDRFQVKSYLGRPWKQYARTVVMESNIGDFIQPEGWHVWEGEQFLDTLYYAEYANVGPGADVKGRVKWKGYHPNINKDEAAQFTASQFLRGGPSGKAEDWLQATGIPFNAGFIKGN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00053 532 ProSitePatterns Pectinesterase signature 2. 355 364 IPR033131 -
Sebi353g00053 532 Pfam Plant invertase/pectin methylesterase inhibitor 1 155 IPR006501 GO:0004857
Sebi353g00053 532 Pfam Pectinesterase 211 507 IPR000070 GO:0030599|GO:0042545
Sebi353g00053 532 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 1 159 IPR035513 -
Sebi353g00053 532 PANTHER PECTINESTERASE 1 518 - -
Sebi353g00053 532 Gene3D - 205 528 IPR012334 -
Sebi353g00053 532 NCBIfam pectinesterase inhibitor domain 1 156 IPR006501 GO:0004857
Sebi353g00053 532 CDD PMEI-like_3 1 161 - -
Sebi353g00053 532 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 160 IPR035513 -
Sebi353g00053 532 FunFam Pectinesterase 205 528 - -
Sebi353g00053 532 SUPERFAMILY Pectin lyase-like 209 526 IPR011050 -
Sebi353g00053 532 SMART PMEI_2 1 155 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00053 Sebi-Chr353 665680 667623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00053 1 528 Carbohydrate Esterase AT2G26450 40.824 3.64e-134 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00053 K01051 - gmx:100789650 873.618