Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00050 ATGGAAGCTAGATTTGGTGGAGAAGCTTATCATTTTTATGGCGTGGGTGCTTCCTCGGATTTGAGAGTTGTGGGGAAGAGGTCCCCAGAATGGGATTTGAATGATTGGAGATGGGATGGTGATCTGTTCATAGCTAGTCGGGTGAATCCAGTGCCAGCAGATGGTGTGGGAGTGGGACAGCAATTTCTCCCTCTTGAGTCTGGGATTCGGGCCTCCAACAGCTCTTCTTCCTGCTCTGAGGAAGTAGATCTTAGGAATCCAAAGGGGAACAGGGAAGGGGAGAAGAAAAGGAGAGTTATTGTGCTGGAGGATGATGATTTGAATGAGGAAGCAGGTACCCTTAGTTTAAAGCTTGGTGGGCATGCTTCTCCAATGGTGGATAGGGAGATTGCGAGCTGGGATGGTATGAATGGTAAAAAAAGCAGAGTAGCTGGAGGTACTTCAAATCGAGCTGTTTGTCAGGTGGAGGACTGTGGTGCAGATCTGAGCAGGGCTAAGGATTATCACAGGCGTCATAAAGTTTGTGAGATGCACTCCAAGGCCAGCAGAGCGCTTGTGGGCAATGCAATGCAGAGGTTCTGTCAACAATGTAGCAGGTAA 600 0.4867 MEARFGGEAYHFYGVGASSDLRVVGKRSPEWDLNDWRWDGDLFIASRVNPVPADGVGVGQQFLPLESGIRASNSSSSCSEEVDLRNPKGNREGEKKRRVIVLEDDDLNEEAGTLSLKLGGHASPMVDREIASWDGMNGKKSRVAGGTSNRAVCQVEDCGADLSRAKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSR 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00050 199 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 88 199 IPR044817 GO:0003677
Sebi353g00050 199 SUPERFAMILY SBT domain 151 199 IPR036893 GO:0003677|GO:0005634
Sebi353g00050 199 Gene3D - 148 199 IPR036893 GO:0003677|GO:0005634
Sebi353g00050 199 MobiDBLite consensus disorder prediction 70 92 - -
Sebi353g00050 199 Pfam SBP domain 153 199 IPR004333 GO:0003677
Sebi353g00050 199 ProSiteProfiles Zinc finger SBP-type profile. 150 199 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00050 Sebi-Chr353 628830 629429 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00050 1 199 SBP-box Gene Family AT3G60030 43.137 8.02e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Sebi353g00050 SBP 8.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00050 - - gmx:100814273 341.273