Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00049 ATGACTGAGAATAGTGAACAAGGGGCCAAGAATTTGTCTAACCTTTTGCAGGAACCGGAGAATTTGTTGAGAGAAGCTGGTTCATCTAGGAAGTCAGAGATGGTGTCAACTTTATTCTCCAATGGTTCTCAAGGCTCTCCACCTGTTATAAGACCACATCAAACTGTATCTATGACTAAAATGCAACAACAAGTGATGCATGCACATGATGCTAGGGCTTCTGATCCGCAACTCACGTCTTCTATAAAGCCCAGCATTTCAAACAGTCCTCCATCTTACTCAGAAGCCAGAGACAGTACTGCTAGACAAATCAAGATGAATAACTTTGATTTGAATGATGTATATATTGACTCAGAGTCAGATGATGGCATGGAAGATCTAGAAAGATTGCCTGTCTCTACAAATCTTGTCACTAGCTCTCTTGATTACCCATGGACTCAACACGATTCTCATCAGTCAAGTCCACCTCAGACAAGTGGAAATTCAGATTCTGCATCTGCGCACTCCCCGTCTAGTTCCAGTGGAGAAGCTCAGGTAGTGTGTGTTCCTGGTGCTGATGTCTTGACAAGCTGTTCCATCTTGGTGAGTTTCTTAAGATTTGAAGATTTAATGTATATGCTTGCACAAATCCTGGTTCAAATAGCATGTATGGAGTTGACCTTTTGTTTGATACAAAACCATTCACCTGTGTTGAGGATGTTACATGATGGTGGTGCACGCAGTAGTTATGGTTATGGTGGCGAGAAAGACAAAATTGAACCATCCTTAGGCGTCAAATGTGATGCTGCTTGTCTAGTCGCACAGATCGAATTGTTTTTAAAACTCTTTGGTAAAGAGCCGAATGATTTTCCTCTTATACTTAGAGCACAGATTCTTGACTGGTTATCCCACAGTCCTACTGATATTGAAAGCTACATACGACCTGGTTGTATTGTTTTGACCATTTATCTACGTCAGGCTGAAGCTGTATGGGAGGAACTTTGCTATGATCTGACTACCAGTTTGAGTAGGCTGCTGGATGTCTCAGATGATACTTTTTGGAGAACTGGATGGGTTCATATCAGGGTGCAGCATCAGATGGCATTCATTTTCAATGGTCAAGTTGTCATAGATACATCGCTACCTTTCAGAAGTAACAATTATAGCAAGATTTTGACTGTTAGTCCAATTGCTGTTCCAGCATCAAAGAGAGTTCAATTTAAAGTTAAGGGGGTCAACATGATACGCCCTGCCGTTAGGTTAATGTGTGCGTTAGAGGGAAAATATCTGGCCTGTGAAGATGCTCATGAGTCAACGGATCAATACCCCAAGGAGCTTGATGGATTTCAGTGCATCCGGTTTGCATGTTCTGTCCCTGTGACGAATGGAAGAGGATTTATTGAGATTGAGGACCAGGGTTTGAGTAGCAGCTTTTTTCCTTTCATAGTTGCGGAGGAGGATGTTTGCTCAGAAATCTGTGTTCTTGAGCCTCTACTAGAGTTAAGTGAAACTGATCCAGATATTGAAGGGACTGGAAAAATGAAAGCCAAAAGTCAAGCTATGGATTTCATTCATGAAATGGGTTGGCTTCTTCACAGAAGCCAATTGAAATCTAGGATGATTCACTTGAACTCTAGTGCAGATCACTTTCCATTAAAACGGTTCAAGTGGCTTATGGAGTTTTCTATGGACCGTGATTGGTGTGCGGTAGTGAAAAAACTGTTGAACCTACTTCTTGGTGGAACTGTGAATACAGGGGACCACCCTTCCCTGGATCTTGCACTTTCTGAGATGGGTCTCCTTCACAGAGCTGTAAGGAGAAATAGCAAGCACTTAGTGGAGCTGCTTTTGAGATATGTTCCTGATGAAGACAGGGCTGAAAAGGCACGAGTTGATGGAGAGAATCAGAGATTCTTGTTTAGACCTGATGTTGTTGGTCCTGCTGGTTTGACGCCACTCCATATAGCAGCTGGGAAAGATGGTTCTGAGGATGTACTGGATGCTTTAACCAATGATCCTTGCGAGGTGGGAATTGAGGCATGGAAGAATGCTCGTGACAGCACAGGCTCCACACCTGAGGATTATGCACGTTTACGTGGCCATTATACTTACATTCACTTAGTGCAGAAAAAAATTAACAAGAGACAAGGAGCAGCTCATGTGGTGGTTGAGATTCCAAGCAATCTGACAGAGAGCAATACAAACCAGAAGCAAAATGAACCATCCACAGGCTTTGAGATTGGAAAGGCTGAAGTACCACGTGGCCAAGGGCACTGTAAACTTTGTGATAGCAAATTTTCTTGTAGAACTGCAGTAGGCAGGTCTTTGGTATACAGACCTGCGATGCTCTCTATGGTGGCCATAGCAGCAGTCTGTGTCTGTGTGGCCCTTCTGTTTAAAAGCTCACCCGAAGTTCTATACATGTTTAAACCCTTCAGATGGGAATCGTTGGATTTCGGAACAAGTTAA 2448 0.4293 MTENSEQGAKNLSNLLQEPENLLREAGSSRKSEMVSTLFSNGSQGSPPVIRPHQTVSMTKMQQQVMHAHDARASDPQLTSSIKPSISNSPPSYSEARDSTARQIKMNNFDLNDVYIDSESDDGMEDLERLPVSTNLVTSSLDYPWTQHDSHQSSPPQTSGNSDSASAHSPSSSSGEAQVVCVPGADVLTSCSILVSFLRFEDLMYMLAQILVQIACMELTFCLIQNHSPVLRMLHDGGARSSYGYGGEKDKIEPSLGVKCDAACLVAQIELFLKLFGKEPNDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAVWEELCYDLTTSLSRLLDVSDDTFWRTGWVHIRVQHQMAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAVPASKRVQFKVKGVNMIRPAVRLMCALEGKYLACEDAHESTDQYPKELDGFQCIRFACSVPVTNGRGFIEIEDQGLSSSFFPFIVAEEDVCSEICVLEPLLELSETDPDIEGTGKMKAKSQAMDFIHEMGWLLHRSQLKSRMIHLNSSADHFPLKRFKWLMEFSMDRDWCAVVKKLLNLLLGGTVNTGDHPSLDLALSEMGLLHRAVRRNSKHLVELLLRYVPDEDRAEKARVDGENQRFLFRPDVVGPAGLTPLHIAAGKDGSEDVLDALTNDPCEVGIEAWKNARDSTGSTPEDYARLRGHYTYIHLVQKKINKRQGAAHVVVEIPSNLTESNTNQKQNEPSTGFEIGKAEVPRGQGHCKLCDSKFSCRTAVGRSLVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYMFKPFRWESLDFGTS 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00049 815 MobiDBLite consensus disorder prediction 30 64 - -
Sebi353g00049 815 MobiDBLite consensus disorder prediction 1 18 - -
Sebi353g00049 815 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 87 702 IPR044817 GO:0003677
Sebi353g00049 815 SUPERFAMILY Ankyrin repeat 589 701 IPR036770 -
Sebi353g00049 815 Gene3D - 561 718 IPR036770 -
Sebi353g00049 815 MobiDBLite consensus disorder prediction 74 99 - -
Sebi353g00049 815 MobiDBLite consensus disorder prediction 1 99 - -
Sebi353g00049 815 MobiDBLite consensus disorder prediction 144 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00049 Sebi-Chr353 619498 624282 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00049 271 815 SBP-box Gene Family AT2G47070 58.984 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00049 - - gmx:100809806 959.518