Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00047 ATGTCTGTTTCTCTGTTTGGTATTTCTGCTATGACTGAGAATAGTGAACAAGGGGCCAAGAACTTGTCTGACCTTTTGCGGGAACCAGAGAATTTGTTGAGAGCAAGTGGTTCATCTAGGAAGTCAGAGATGGTGTCAACTTTATTCTCCAATGGTTCTCAAGGCTCTCCACCTGTTATAAGACCACATCAAACTGTATCTATGACTAAAATGCAACAGCAAGTGATGCATGCACATGATGCTAGTGCTGCTGATCCACACCTCATGTCTTCTATAAAGCCTAGCATTTCAAACAGTCCTCCATCTTACTCAGAAGCCAGAGACAGTGCTGATAGACAAATCAAGATGAACAACTTTGACTTGAATGATGTATATATTGACTCAGATGATGGCATGGAAGATCTAGAAAGATTGCCCGTCTCTTCAAATCTTGTCACTAGCTCTCTTGATTACCCATGGACACAACAAGATTCTCATCAGTCAAGTCCACCTCAGACAAGTGGAAATTCAGATTCTGCATCTGCCCACTCCCCGTCTAGTTCCAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTTAAACTCTTTGGTAAAGAGCCGAATGATTTTCCTCTTATACTTAGAGCACAGATTCTTGATTGGTTATCTCACAGTCCTACTGATATTGAAAGTTACATACGACCTGGTTGTATTGTTTTGACCATTTATCTGCGTCAGGCTGAAGCTATTTGGGAGGAACTTTGCTATGATCTGACGTCCAGTTTGAGTAGGCTGCTGGATGTCTCAGATGATACTTTTTGGAAAACTGGATGGGTTCACATTAGGGTGCAGCATCAAATGGCATTCATTTTCAATGGTCAAGTTGTCATAGATACATCGCTACCTTTCAGAAGTAACAATTATAGCAAGATTTTAACTGTTAGTCCAATTGCTGTACCAACATCAAAGAGAGTTCAATTTAAAGTTAAGGGGGTCAACATGATACGCCCTGCCGCTAGGTTAATGTGTGCTTTAGAAGGAAAATATCTGGCCTGTGACGATGCCCATGAGTCAATGGATCAATACCTCAAGGAGTTTGATGGACTTCAGTGCATCCAGTTTGCATGTTCTGTCCCAGGGACGAATGGAAGAGGATTTATTGAGATTGAGGACCAAGGTTTGAGTAGCAGCTTTTTTCCTTTCATAGTTGCGGAGGAAGATGTTTGCTCAGAAATCTGTGTACTTGAGCCTCTACTGGAATTAAGTGAAACAGATCCAGATATTGAAGGGACTGGAAAAATGAAAGCCAAAAGTCAAGCTATGGATTTCATTCATGAAATGGGTTGGCTTCTTCACAGAAGCCAATTGAGGTCTAGGATGGTTCACTTGAACTCAAGTGCAGATCTCTTTCCACTAACACGGTTCAAGTGGCTTATGGAGTTTTCTATGGACCGTGATTGGTGTGCAGTAGTGAAAAAACTGTTGAATCTACTGCTTGATGGAACTGTGAATACAGGGGACCACCCTTCCCTGGATCTTGCACTTTCAGAGATGAGCCTCCTTCACAGAGCTGTAAGGAGAAATAGCAAGCAGTTAGTGGAGCTGCTTTTGACATATGTTCCTGATAATATTTCTGATAAAGACAGGGCTGAAAAGGCACTAGTTAATGAAGAGAATCAGAGCTTCTTGTTTAGACCTGATGCTGTTGGTCCTGCTGGTTTAACGCCACTCCATATAGCCGCTGGGAAAGATGGTTCTGAGGATGTACTGGATGCTTTAACTAATGATCCTTGCAAGGTGGGAATTGAGGCATGGAAGAGCGCTCGTGACAGCACAGGCTCCACACCTGAGGATTATGCACGTTTACGTGGCCATTATACTTACATTCACTTAGTGCAGAAAAAAATTAACAAGAGACAAGGAGCAGCTCATGTGGTGGTTGAGATTCCAAGCAATCTGACAGAGAGCAATACAAACCAGAAGCAAAATGAACCGTCCACGAGCTTTGAGATTGGAAAGGCTGAAGTACCACGTGGCCAAGGGCACTGTAAACTTTGTGATAACAAATTTTCTTGTAGAACTGCAGTAGGCAGGTCTTTGGTATACAGACCTGCGATGCTCTCTATGGTGGCCATAGCAGCAGTCTGTGTCTGTGTGGCCCTTCTGTTTAAAAGCTCACCCGAAGTTCTATACATGTTTAAACCCTTCAGATGGGAATCGTTGGATTTCGGAACAAGTTAA 2223 0.4274 MSVSLFGISAMTENSEQGAKNLSDLLREPENLLRASGSSRKSEMVSTLFSNGSQGSPPVIRPHQTVSMTKMQQQVMHAHDASAADPHLMSSIKPSISNSPPSYSEARDSADRQIKMNNFDLNDVYIDSDDGMEDLERLPVSSNLVTSSLDYPWTQQDSHQSSPPQTSGNSDSASAHSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLILRAQILDWLSHSPTDIESYIRPGCIVLTIYLRQAEAIWEELCYDLTSSLSRLLDVSDDTFWKTGWVHIRVQHQMAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAVPTSKRVQFKVKGVNMIRPAARLMCALEGKYLACDDAHESMDQYLKEFDGLQCIQFACSVPGTNGRGFIEIEDQGLSSSFFPFIVAEEDVCSEICVLEPLLELSETDPDIEGTGKMKAKSQAMDFIHEMGWLLHRSQLRSRMVHLNSSADLFPLTRFKWLMEFSMDRDWCAVVKKLLNLLLDGTVNTGDHPSLDLALSEMSLLHRAVRRNSKQLVELLLTYVPDNISDKDRAEKALVNEENQSFLFRPDAVGPAGLTPLHIAAGKDGSEDVLDALTNDPCKVGIEAWKSARDSTGSTPEDYARLRGHYTYIHLVQKKINKRQGAAHVVVEIPSNLTESNTNQKQNEPSTSFEIGKAEVPRGQGHCKLCDNKFSCRTAVGRSLVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYMFKPFRWESLDFGTS 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00047 740 SMART ANK_2a 510 540 IPR002110 GO:0005515
Sebi353g00047 740 SMART ANK_2a 566 596 IPR002110 GO:0005515
Sebi353g00047 740 MobiDBLite consensus disorder prediction 91 106 - -
Sebi353g00047 740 MobiDBLite consensus disorder prediction 153 187 - -
Sebi353g00047 740 MobiDBLite consensus disorder prediction 79 109 - -
Sebi353g00047 740 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 82 627 IPR044817 GO:0003677
Sebi353g00047 740 SUPERFAMILY Ankyrin repeat 510 626 IPR036770 -
Sebi353g00047 740 Gene3D - 477 665 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00047 Sebi-Chr353 600532 605902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00047 108 740 SBP-box Gene Family AT2G47070 58.814 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00047 - - gmx:100809806 1240.71