Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00028 ATGGATGTTAAGGTTAAGAAAGGTGAGTCTGCAACACGAGCACACATGCAGAACAATGATAACGAGATAGGCATCAGAAAAGGTCCATGGACGTTAGACGAGGACACCATTCTCGTCAATTACATTACCACCCATGGTGAAGGTCACTGGAATTCCGTGGCATGTTGTGCAGGCATGTGGTCCAAGATTGCTCAACACCTTCCTGGTAGAACAGACAATGAAATTAAAAACTATTGGAGGACCAGAGTGATAAAACAAGCTAAGCAGCTAAAGTGTGATGTGAACAGCAAACAGTTCAGAGACGCCTTGCGTTACGTGTGGATGCCTCGCTTGCTCGAGAGGGTTCAGCCAGCATCTCAATCTCTCGAGCCTCAGAATCAACTACTGGACCCAAACTTAAGTGCTGCAGCTGGGGTCCTAAACGGTTCTTCAGATTCAGGAACAGAGTGGGTAAAACAGAACCACTCCTCGTCCTGTGTCAGTGGCACTTGCTCAGACTCATCATCATCCGTGGAGTTCCAACTTCCTTCAAATTCGGACCATATTGATTCTTCGGAACAGTTAGGTCCTAAAGGCTCGGATCTATGGCCAAGCCAGATGTTACAACAGGGGAACGGTGGTGACTCGTTAGAGAGTTTGTGGAATGATGAGAGTACTGTATGGTTTTTGCAATTGCAACAGCTTTCTGATGACCTCGAAATAAAAAACAATTTCATTGCGTGA 723 0.4592 MDVKVKKGESATRAHMQNNDNEIGIRKGPWTLDEDTILVNYITTHGEGHWNSVACCAGMWSKIAQHLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKQFRDALRYVWMPRLLERVQPASQSLEPQNQLLDPNLSAAAGVLNGSSDSGTEWVKQNHSSSCVSGTCSDSSSSVEFQLPSNSDHIDSSEQLGPKGSDLWPSQMLQQGNGGDSLESLWNDESTVWFLQLQQLSDDLEIKNNFIA 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00028 240 ProSiteProfiles Myb-like domain profile. 22 83 IPR001005 -
Sebi353g00028 240 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 24 59 IPR044676 GO:0003700|GO:0006355|GO:0043565
Sebi353g00028 240 CDD SANT 29 81 IPR001005 -
Sebi353g00028 240 MobiDBLite consensus disorder prediction 170 186 - -
Sebi353g00028 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 87 IPR017930 -
Sebi353g00028 240 Pfam Myb-like DNA-binding domain 27 81 IPR001005 -
Sebi353g00028 240 SMART sant 26 85 IPR001005 -
Sebi353g00028 240 SUPERFAMILY Homeodomain-like 24 79 IPR009057 -
Sebi353g00028 240 Gene3D - 25 88 - -
Sebi353g00028 240 MobiDBLite consensus disorder prediction 170 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00028 Sebi-Chr353 389752 390867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00028 6 116 MYB Transcription Factor Family AT3G06490 46.405 1.46e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi353g00028 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00028 K09422 - gmx:778065 225.328