Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00026 ATGGTTCCGAAAACCCATTTCCATGTCATTCTATTTCTGCTTTCAACGTTATGCATCACTTGCAGTTCCAGCTCTGATTTTGATAAGTGGATATCTTGGAATGTGAAGAATTACCTGCAGGAAAAGACCATTTTGAAAACCAAATGGAACGTGGCTACACCTGGTGCCGCTCTAGATTTGAAGCTGAGGCAGGCTGAAAGTAACAAAGTTAGAATAAGAGTTAGCCAAGACGGTTCTGGTGACTTCAAGACCATTACAGAAGCTCTTAATAGCATTCCACCTCGCAACACTAGGAGAGTCATACTGTTGATTGCACCAGGTATTTATAGGGAGAAAGTCATGGTGCCGAGAACATTGCCTTTCATTACATTCTTAGGGAACGCGACGGATCCACCAACCATCACTGGAAATGATACAGCGTCTGTCACTGGAAGAGATGGGACTCCCATAGGAACGTTCCAGAGTGCAACTGTTGCTGTGGATGCTACCTATTTTATGGCCATCAACATAAAATTTGAGAACACCGCTCCGCACGTGATTGGAAAGGTGGGGGAACAAGCTGTGGCGCTTCGCATCTCAGGAACCAAAGCTGCTTTTTACAATTGCACTTTCTATGGGGCTCAAGACACACTCTATGATCACAAAGGCCTTCACTACTTCAACAATTGCTTTATTCAAGGCTCTGTTGATTTCATATTTGGCTCTGGGAGGTCCCTTTACGAGAACTGCTATCTAAATTCCATAACCAAGAAGGTGGCTTCCATCACTGCTCAAAAGCGTACAAATTCGTCATTGGAGAGTGGATTTTCGTTCAAAAACAGCATAGTAACAGGCAGTGGGCAGGTTTATCTTGGAAGAGCATGGGGAGATTATTCCAGAGTTGTATTCTCTTACACCTACATGGACAAGATAGTTCACCCCAGAGGATGGAGTGATTGGGGTGACCAAAAGCGTGACTTGGGTGTATATTATGGAGAATACAAGTGCAGTGGGCCAGGAGCTAACTTGAGTGGAAGAGTGCCATGGGCACGGGTACTTAGCGACGAAGAGGCCAAGCCTTTTATTGGGATTCACTTCATTCAAGGGGACACTTGGCTCATCACCCCCTAA 1110 0.4505 MVPKTHFHVILFLLSTLCITCSSSSDFDKWISWNVKNYLQEKTILKTKWNVATPGAALDLKLRQAESNKVRIRVSQDGSGDFKTITEALNSIPPRNTRRVILLIAPGIYREKVMVPRTLPFITFLGNATDPPTITGNDTASVTGRDGTPIGTFQSATVAVDATYFMAINIKFENTAPHVIGKVGEQAVALRISGTKAAFYNCTFYGAQDTLYDHKGLHYFNNCFIQGSVDFIFGSGRSLYENCYLNSITKKVASITAQKRTNSSLESGFSFKNSIVTGSGQVYLGRAWGDYSRVVFSYTYMDKIVHPRGWSDWGDQKRDLGVYYGEYKCSGPGANLSGRVPWARVLSDEEAKPFIGIHFIQGDTWLITP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00026 369 Gene3D - 66 368 IPR012334 -
Sebi353g00026 369 Pfam Pectinesterase 72 363 IPR000070 GO:0030599|GO:0042545
Sebi353g00026 369 FunFam Pectinesterase 67 368 - -
Sebi353g00026 369 SUPERFAMILY Pectin lyase-like 71 366 IPR011050 -
Sebi353g00026 369 ProSitePatterns Pectinesterase signature 2. 225 234 IPR033131 -
Sebi353g00026 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 61 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00026 Sebi-Chr353 344707 347175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00026 7 366 Carbohydrate Esterase AT5G47500 43.251 1.17e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00026 K01051 - qsu:112011696 570.852