Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00007 ATGGAGTTACTGGGAGGGATCAATCCTCTTCCTATTACTACTGAACATGAGAACGAAACCCATTTCTTCAAAGACCAAAACCACCACCAGCAACAAGATTTCAACTTTGATAACTTGATTCTAGAAGATTTCAACTTTGAACCTACTCTGGAACCAACACATGGGTTTCAAGAAACAAGAGGGATAAAGAATCAAGAAGTGGCAAGTCCACAACTTGTTAGATACAAGAAGCAAGCTCCACCATCTTCTTTAGCATCACTAGAGCTTCTGAAGAATTATGGAGGCAGGTTCAAGTGGCTAAAGGGAAAAAACCTAAGAAAAATTGAAACTTGTGTGAGTCCCCAGAACCAGAAGTTGTCAACTGAAGACATAATAAGAGTGGCAGGAGCAAGGTATATCCAACACTCAACACAATGGCATGATAATCTTTGCATCCCTATGCATCCATATGGAACTGGTCTTGTGGGTTTGTCTGAGGAAGAAAATAGAGATGTTGAACTTGCTCAGTTTCTTCTTGCAGCAGCAGAGAGGGTAGGGTGTCAACAATTTGAACGTGCAAGCATGTTACTTTACCATTGTCAATTGAATTCACCAGATGGTGGAAGCCCTGTTCAGCGAGTTGTCTTTCATTTCGCTCAAGCTCTCAGAGAAAGAATCAACAAAGAAATTGGAGGAAGGGTGGCATTGAAGGGAAGTGAGAAAAATGAGGAAAGGGAATTGATTGAGAATTTGTTATTGGATACTAACATAGCCATTATATGTCATCAAAAAATTCCTTTCAATCAGGTGATGCAGTTTCCTGGTGTACAAGCTATAGTGGAACATGTTGCATCCCAAACCAAAATCCATCTGATAGATCTTGATATTGGATATGGGGTGTTATGCACATGTGTCATGCAAGCTTTGGCAGAGCGCAAGGAAAGGCCAGTTGAGCTTCTGAAGATCACTGCCATTGGAATTGAAGGCAAGATCAACCTAGAAGAGACAGGAAAAAGGTTAATGAGTTTTGCTAAATCCTTGAACTTGCCCCTTTTATATAAAACAATTTATGTTACAGATATGATAGAGATCAAGGTAGAGCAATTTGAAATTGAAGATGATGAAGCTGTGGCTATCTATTCTCCTTATTTACTAAGGACTATGGTATCAAATTCTGATTGCTTGGAGAACTTGATGAAGGTGATAAGGAAAATCAAACCATCTATAATGATAGTTCTTGAATTGGAAGCAAACCATAATTGTCCCTCCTTTGTGAATCGCTTTGTTGAAGCATTGTTCTTCTTTTCCGCATATTTTGACTGCATTGAGACCTGCATAAAACAGGATTATGAGTGCAGAATGAGAATGGAAACAATATTAGCTGAAGGGATAAGAAACATTGTTGCTATGGAAGATAGAGAAAGGACAGTTAGGAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTACAGAATGGTGGAAACTGGATTTAGCGAGTCATCTTTGTACCAAGCTAACTTGGTTGCCAAGAAATTTGGTTGTGGGAATTTCTGTACTATAGATAAAAATGGGAAATGTCTAATAGTTGGATGGAAGGGAACCCCAATTCATTCAATCTCAGCTTGGAAGTTTCTTTGA 1623 0.3894 MELLGGINPLPITTEHENETHFFKDQNHHQQQDFNFDNLILEDFNFEPTLEPTHGFQETRGIKNQEVASPQLVRYKKQAPPSSLASLELLKNYGGRFKWLKGKNLRKIETCVSPQNQKLSTEDIIRVAGARYIQHSTQWHDNLCIPMHPYGTGLVGLSEEENRDVELAQFLLAAAERVGCQQFERASMLLYHCQLNSPDGGSPVQRVVFHFAQALRERINKEIGGRVALKGSEKNEERELIENLLLDTNIAIICHQKIPFNQVMQFPGVQAIVEHVASQTKIHLIDLDIGYGVLCTCVMQALAERKERPVELLKITAIGIEGKINLEETGKRLMSFAKSLNLPLLYKTIYVTDMIEIKVEQFEIEDDEAVAIYSPYLLRTMVSNSDCLENLMKVIRKIKPSIMIVLELEANHNCPSFVNRFVEALFFFSAYFDCIETCIKQDYECRMRMETILAEGIRNIVAMEDRERTVRNVKIDVWRRFFARYRMVETGFSESSLYQANLVAKKFGCGNFCTIDKNGKCLIVGWKGTPIHSISAWKFL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00007 540 ProSiteProfiles GRAS family profile. 158 538 IPR005202 -
Sebi353g00007 540 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 124 528 IPR005202 -
Sebi353g00007 540 Pfam GRAS domain family 168 538 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00007 Sebi-Chr353 65350 66972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00007 155 539 GRAS Transcription Factor Family AT3G03450 27.919 2.57e-46 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi353g00007 GRAS 6.5e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00007 - - gmx:100791952 688.723