Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi353g00006 ATGGTGTCCAAACCTACCGACTCTGCTCTCAAATCTCTTCCAAAACAACATGGAGAGCCACCAACCGATGCTGCCGGAACCTTGTCCGTCAAGATAAATCAGTTGAAAAAGCAAATACAGGCGGAGAGAATTGTATCCATTAAAGAAAAACTTCAGAGGAATGAGAAGAAACTACAATGTCATATTTCAGAAGTCATGTCAGCAATATCATCCAGGGACTCTTCACAGACGGAGGAAAATAGGAAAAGCTCAATTCTCTCATCCAGAATTGATCATCCTTTGTGTAAATTCAATGGTTTCTCTCAAGTTTCAGGAGACAGAGACCACAACAATCAAGATGAATTATCTGCTACAAGCATCAAGATTCCATATATGGAAAGATTACCACCATATACATCTTGGATATTTTTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCAGTTGTTGGAAGAAGGCGTATCTACTATGATCAACATGGAAGTGAAGCACTAATATGTAGTGACAGTGAGGAAGAGATAACAGAACCTGAGGAAGAAAAACATGAATTTTCTGAGGCTGAAGACCGTATTCTATGGATGGCATTTGAGGAACATGGTTTAAATGAGGAGGTATTGAATATTGTTAGCAAGTCCGTTGGAGGTACCAATTTAGAAATTCAGGAGAGGTACAAAAGTATCAAGGAAAATAATATTGGTAGGCTTGACCAACATTCAGAAGGATCAGGAGAATATGAATCTCCTGTTGGCATATGTCCAGAGAAAAGCCTTAGTGCTGCATTAGATTCTTTTGATAACCTTTTCTGTCGCCGGTGCCTGCAGATTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTAATCTATCCTCGTGAAAAACAGACAGTTTGGTCTGAGCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGCAGTTAAAGGCTGTCAAAAGTTTGACAGATTCAACTCCAGGGTCTTTTCAGGATAAGAAAACTACAATTATAGAAGAGGCAGATGGGATATTGGCACCATCCAGTGCAGAGGAACCTGATAATCAGAGTACCGCACTTCCAACAGAAGTTGATTGTCATGGATATCTCAATTTAAATGCTCCTGTCTCAGAAAATTTGGGGAAACGAAAGGTCACAGATCAATCAGACACAGAACTATGTGACTCCATATTGCCTCCTGATGATCCTCAGAATTCTTGTAAAAAGCTGAAGAGAGTCTCAGATGATGTAGGTACTGTAATTAGTGATTATAACAAGAACCTAAATTTAGGTGCATGTGATGAAAGTAAACATATAATTACTAGTGCAATTTTGGAAAAATCTGTTGAACACGCTTCAAATAAATTAATAGTTTCTTCAAGCACTTGCCATGGTGAGCATGACAAAAGTGTTGGGGATGGACCACAAGATGTCACAAATGAGACAGAAATTAAAAAGTTGTCCAATTCAATGGAAGGGCAAGTGGATGCGATGCTAAGTCTCTCGGATTGGAAACCTCTGGAGAAAGAGTTATACTTGAAGGGAGTTGAAATGTTTGGCAGAAACAGTTGCCTCATCGCAAGAAACTTACTTTCTGGTTTGAAGACTTGCGTGGAAATAGCTAGTTACATGCATGCTGGAGGAGTGTCGATGCCCCACAGATCTCTTGTTGCTCCTAGTTCAATCATGGACGACAAGGGAAAATTTGACGGAGAGTGCACAGACCAAGACATGCCATCTAGGTCACGGTTGCTGAGAAAAAGGGGTAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCTTCAATATGGAAAAGAATTGCTGATGGTAAAAATCAATCTTGCAAGCAGTATACACCATGCGGATGTCAGTCAATGTGTGGAAAGGATTGTTCTTGTGTTAATGGTGGAACTTGCTGTGAAAAATATTGTGGTTGTTCAAAAAGCTGCAAAAACCGGTTCAGAGGATGCCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGCCCATGTTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGTCGAAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGGGAGCCACCTCGGCATGGAGAAGGTCAATGCGGCAATATGAGGCTCCTTTTAAGGCAACAACAGAGGATTCTCTTGGCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTGAAGAACCCTGTTAACAAAAATGATTACCTTGGAGAGTACACAGGGGAACTAATCTCCCACAGAGAAGCTGATAAGCGTGGGAAAATATATGATCGTGCCAATTCATCTTTCCTTTTTGACTTGAATGATCAGTATGTTCTTGATGCTTACCGCAAAGGAGACAAGTTGAAATTTGCGAACCACTCATCAAACCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACCGAGTAGGCATATTCGCCAAGGAACACATTGATGCTAGTGAGGAGCTCTTCTATGATTACCGTTACGGTCCAGATCAAGCACCCCCATGGGCTCGTAAACCTGAAGGTTCCAAGAGAGACGAATCAGCAGTTCCTCAAGGCAGAGCAAAGAAACACCAATCTCATTGA 2610 0.418 MVSKPTDSALKSLPKQHGEPPTDAAGTLSVKINQLKKQIQAERIVSIKEKLQRNEKKLQCHISEVMSAISSRDSSQTEENRKSSILSSRIDHPLCKFNGFSQVSGDRDHNNQDELSATSIKIPYMERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEEITEPEEEKHEFSEAEDRILWMAFEEHGLNEEVLNIVSKSVGGTNLEIQERYKSIKENNIGRLDQHSEGSGEYESPVGICPEKSLSAALDSFDNLFCRRCLQIFDCRLHGCSQPLIYPREKQTVWSEPEGDRKPCSDQCYLQQLKAVKSLTDSTPGSFQDKKTTIIEEADGILAPSSAEEPDNQSTALPTEVDCHGYLNLNAPVSENLGKRKVTDQSDTELCDSILPPDDPQNSCKKLKRVSDDVGTVISDYNKNLNLGACDESKHIITSAILEKSVEHASNKLIVSSSTCHGEHDKSVGDGPQDVTNETEIKKLSNSMEGQVDAMLSLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCVEIASYMHAGGVSMPHRSLVAPSSIMDDKGKFDGECTDQDMPSRSRLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKDCSCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRHGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESAVPQGRAKKHQSH 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi353g00006 869 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 27 868 IPR045318 GO:0006338|GO:0042054
Sebi353g00006 869 CDD SET_EZH 720 836 - -
Sebi353g00006 869 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 15 869 IPR025778 GO:0031519
Sebi353g00006 869 ProSiteProfiles SET domain profile. 720 835 IPR001214 GO:0005515
Sebi353g00006 869 MobiDBLite consensus disorder prediction 846 862 - -
Sebi353g00006 869 SMART CXC_2 655 692 IPR033467 -
Sebi353g00006 869 FunFam Putative histone-lysine N-methyltransferase EZH2 621 837 - -
Sebi353g00006 869 MobiDBLite consensus disorder prediction 840 869 - -
Sebi353g00006 869 MobiDBLite consensus disorder prediction 1 26 - -
Sebi353g00006 869 Gene3D SET domain 621 837 IPR046341 -
Sebi353g00006 869 SUPERFAMILY SET domain 591 839 IPR046341 -
Sebi353g00006 869 Pfam SET domain 731 834 IPR001214 GO:0005515
Sebi353g00006 869 ProSiteProfiles CXC domain profile. 607 706 IPR026489 -
Sebi353g00006 869 SMART set_7 720 841 IPR001214 GO:0005515
Sebi353g00006 869 Pfam CXC domain 659 690 IPR041355 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi353g00006 Sebi-Chr353 54662 63152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi353g00006 709 838 C2H2 Transcription Factor Family AT2G23740 26.531 3.53e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi353g00006 SET 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi353g00006 - - gmx:100808730 1502.26