Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi352g00015 ATGCAACATCAGCCTTCCATGAAGCAGATTATGGGAATTATGGCTGAACGAGATGCAGCCATTCAAGAAAGAAATCTGGCCCTTTCTGAGAAAAAGGCAGCACTTGCAGAACGTGACATGGCAATCCTGCAGCGAGATACTGCAATTGCTGAACGAAACAATGCATTAATGGAACGAGATAATGCAATTGCAACCCTTCAGTTTAGAGAAAAATCCTTGACCAGTGGGAGTATGTCATCATGCCCTCCAGGATGCCAAATCTCACGGGGAGTCAAGCATATACATCATTTGCAGCAACAGGTAAACCATTTACCCAATATGGTTGATGCTTCTTACAGCACACGGGAAATGCACACAAGTGATGCTCTCCCAACTGCACCCATTCCTTCAGAGGCTGGGAAGCCTCGGCAGGCCAAGCGACCAAAGGAAGGTAAGTCGGTTTCACCTAATAAGAAGACTCCAAAAACTAGAAAGGTCAAGAAGGAGAGTGAAGATTTAAATAAGATGATGTTTGCCAATAGCAAGGCACATGAGTGGAAGAGTAGTCAGGAGATCGTAAATGGAGGAGATGATCTTAACAAGCAATTAGAGCTGTCAAAGGCTGATTGGAAAGCTCAAGACTTGGCATTAAATCAGGTTGCATATGATGAGTCAACCATGCCAGCCCCCGTGTGTTCTTGTACTGGTGTTCCAAGGCAGTGCTACAAATGGGGGAATGGAGGTTGGCAATCTGCTTGTTGCACAACCACCTTATCAGTGTATCCACTTCCAGCTGTGCCCAACAAGAGGCATGCTCGGATAGGCGGTAGAAAAATGAGTGGAAGTGCTTTCAGTAAACTGCTTAGCCGGCTTGCAGCAGAAGGGCATGATCTGTCAAACCCAGTTGACCTTAAAGACAATTGGGCCAAACATGGGACAAATCGATATATCACAATAAAGTAG 942 0.4544 MQHQPSMKQIMGIMAERDAAIQERNLALSEKKAALAERDMAILQRDTAIAERNNALMERDNAIATLQFREKSLTSGSMSSCPPGCQISRGVKHIHHLQQQVNHLPNMVDASYSTREMHTSDALPTAPIPSEAGKPRQAKRPKEGKSVSPNKKTPKTRKVKKESEDLNKMMFANSKAHEWKSSQEIVNGGDDLNKQLELSKADWKAQDLALNQVAYDESTMPAPVCSCTGVPRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHARIGGRKMSGSAFSKLLSRLAAEGHDLSNPVDLKDNWAKHGTNRYITIK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi352g00015 313 PANTHER - 6 313 IPR010409 -
Sebi352g00015 313 MobiDBLite consensus disorder prediction 115 164 - -
Sebi352g00015 313 MobiDBLite consensus disorder prediction 135 150 - -
Sebi352g00015 313 Coils Coil 26 46 - -
Sebi352g00015 313 Pfam GAGA binding protein-like family 2 313 IPR010409 -
Sebi352g00015 313 SMART GAGA_bind_2 1 313 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi352g00015 Sebi-Chr352 491150 492091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi352g00015 40 313 BBR or BPC Transcription factor family AT5G42520 62.500 4.24e-119 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Sebi352g00015 GAGA_bind 1.5e-102 No_clan