Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi351g00044 ATGTGGTTTACTCATGATTGGCAACTGCTAAAAGATATTTATGTTCTTAATGACGGTGGATGGATCAAACTATACTATAAGGATAGAACTGTTTTCAAAATTTTTGTTTATGATAGGGATTTTGAAGAGGTTCGGTGTCCTATTCCTGTTAAGGAATATGACAGAGGGTTAACCTTTCTTCCTGAAGAAATTGTTCCTGGATATCGTGAGACTGATAATACTGATATTCATCATGTTGATAAGAAGATGACAGAGTTGCATGCAACTGGAAATGTTCTGAACTTGTCAACTGCTCTGTGTGAGAGATTTAGGCACAAAGTTGATTCTGGGGTGCTGAGGGATGAGAATGGTGTTGTTTTTCCTATTAATTTGTCATGGTCTTTGAACGGGAAGGTTGCTTACATCACAAAGGGATGGAAAGAGTTTAGTGTGGAGAAGAATCTGGAGAGGGGCTCTGTTGTCAGATTTAGAGTTGATCCTTCTGATTCTGGTGTTATACATGCAAAGGTTCTTGGAGCATGA 522 0.3851 MWFTHDWQLLKDIYVLNDGGWIKLYYKDRTVFKIFVYDRDFEEVRCPIPVKEYDRGLTFLPEEIVPGYRETDNTDIHHVDKKMTELHATGNVLNLSTALCERFRHKVDSGVLRDENGVVFPINLSWSLNGKVAYITKGWKEFSVEKNLERGSVVRFRVDPSDSGVIHAKVLGA 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi351g00044 173 SUPERFAMILY DNA-binding pseudobarrel domain 73 162 IPR015300 -
Sebi351g00044 173 CDD B3_DNA 81 163 IPR003340 GO:0003677
Sebi351g00044 173 Gene3D - 68 171 IPR015300 -
Sebi351g00044 173 ProSiteProfiles B3 DNA-binding domain profile. 111 173 IPR003340 GO:0003677
Sebi351g00044 173 Pfam B3 DNA binding domain 95 164 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi351g00044 Sebi-Chr351 901130 901729 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi351g00044 B3 6.2e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi351g00044 - K01278 lja:Lj4g3v0423150.1 45.0542