Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi350g00005 ATGAAACCTAACTTTGATCTTGAAGTGGAGGATACTGAAGTTAGCAGCCAGGTTGCTTCCAATATATCTGAAGGTCCTTGTAGTGATAGCCTCGCTAACTCTTCTAACATCACAAATCCAACAGAGCTTCATTCCCATTCAGATACTATCTCACTTGACTTAACTCTCAACTTCAACAATAATGACTTGGTAGGTAGAGATTCAGCAGGATTCTCATTCTCAAGCACAAGTGAGAGCAGCAATGAACCTGCTTCTCAAACAACTGCAGCAGCAACCATCTCAAGAGTTTTCTATTGCAATTACTGTCAGCGTAAATTTCTTAGCTCACAGGCTCTTGGTGGCCACCAAAATGCACACAAGAGAGAAAGGACATTAGCAAAGCGAGCTATGAGAATGGGGTTTTTATCTGAGAGGTATTCTAGTCTAGCATCTCTCCCTCTTCATGGTTCTTTTAGGTCCTTAGGGATAAAGGCACACTCTTCACTGCACCATGGTTTTCCACCAACAATAAGGCCTCCTCCTCCTAAGTTAAAAAGCAATGCAAGATTTGAACAAGGATATCTTGGTCTTCCAATATTTTGGAAGGATGATGAGGCAGAACTGTTGTGGCAAGGTAGTTTTCATCAGGTTCCTGAGGGAGGTAGTGATACTCATCAGAATTTCATACAGACTGAAAGTTCAAATTTGAGTTTTACTGAGGTGAATCCACCAGTTGAGAATTCCACACCTGAATTAACTTTGAAACTTTGA 750 0.4107 MKPNFDLEVEDTEVSSQVASNISEGPCSDSLANSSNITNPTELHSHSDTISLDLTLNFNNNDLVGRDSAGFSFSSTSESSNEPASQTTAAATISRVFYCNYCQRKFLSSQALGGHQNAHKRERTLAKRAMRMGFLSERYSSLASLPLHGSFRSLGIKAHSSLHHGFPPTIRPPPPKLKSNARFEQGYLGLPIFWKDDEAELLWQGSFHQVPEGGSDTHQNFIQTESSNLSFTEVNPPVENSTPELTLKL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi350g00005 249 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 41 168 IPR044246 GO:0009788
Sebi350g00005 249 MobiDBLite consensus disorder prediction 20 42 - -
Sebi350g00005 249 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Sebi350g00005 249 SUPERFAMILY beta-beta-alpha zinc fingers 95 124 IPR036236 -
Sebi350g00005 249 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Sebi350g00005 249 Gene3D Classic Zinc Finger 74 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi350g00005 Sebi-Chr350 135014 135763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi350g00005 78 249 C2H2 Transcription Factor Family AT1G66140 46.569 1.50e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi350g00005 - - gmx:100794851 350.903