Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi34g00057 ATGAGGCCATCAGAGCTAAAGGAAATTGCTGAGAAAAAGTTTGTTGCAAAGGATATTTTGGGAGCAAGAAAGTTTGCTTTGAAGGCCCAAAGTTTATTTCCTAGTCTTGATGGTATTTCTGAAATGTTAACAACAATTAATGTGTATATTTCTGCTACTAATGAAATAAATGGTAAAGTAGTCCTAAACCGGTATGGTATACTTGGTGTGGATCCCCTGGCTGATGATGACACATTGAGGAAACAATATAGAAAGCTGGTTCATATGCTTCACCCTGATAATAACAAGTCCATTGGTGCAGATGGGGCCTTTAAACTAGTTTCAGAGGCATGGAATATACTATCAGATAAGGCTAAAAGGGTAGCATATGATGAGAAGATAAATGCAAGGACTCAAGGGAAAACTATTGAAGAGATTAGCAAGAAACCAAGCACTACCACATATGATGACATGGAGTCCATGTTATCAATAGATGCCCCAAATCCTCATTTCTATTGTTTTGACTTGGATCGAATTGAAGGATCTTTTGGAGAAAATCAAGTATGGGCTGCATTTGATGAAGAAGAAGGGATGCCTCGATATTATGCAGTGATACACAATGTCATTTCTATGAATCCGTTCAAGATGCAGTTCAACTGGCTCCACATGAAGAAGACCAAGGTTGAAAGGACCCCAACTCTGAATTGGGGGACAATATTTCGTCGTGAGTTGGATTTGAGAGAAATCAGGGTCATTCCAAGGAAAGAAATATTGCGGTTCTCTCATCAGGTTCCTTCAACCATACTTAGTGGTGAAGAAGCTCCAGATGCCCCAAATGGTTGTTGGGAGTTGGACCCGCAGCTATTTCATCTGAACATCTTGAGGTAA 867 0.3979 MRPSELKEIAEKKFVAKDILGARKFALKAQSLFPSLDGISEMLTTINVYISATNEINGKVVLNRYGILGVDPLADDDTLRKQYRKLVHMLHPDNNKSIGADGAFKLVSEAWNILSDKAKRVAYDEKINARTQGKTIEEISKKPSTTTYDDMESMLSIDAPNPHFYCFDLDRIEGSFGENQVWAAFDEEEGMPRYYAVIHNVISMNPFKMQFNWLHMKKTKVERTPTLNWGTIFRRELDLREIRVIPRKEILRFSHQVPSTILSGEEAPDAPNGCWELDPQLFHLNILR 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi34g00057 288 Pfam Domain of unknown function (DUF3444) 156 222 IPR024593 -
Sebi34g00057 288 CDD DnaJ 65 116 IPR001623 -
Sebi34g00057 288 PRINTS DnaJ domain signature 99 119 IPR001623 -
Sebi34g00057 288 PRINTS DnaJ domain signature 65 83 IPR001623 -
Sebi34g00057 288 PRINTS DnaJ domain signature 83 98 IPR001623 -
Sebi34g00057 288 SMART dnaj_3 62 119 IPR001623 -
Sebi34g00057 288 ProSiteProfiles dnaJ domain profile. 63 127 IPR001623 -
Sebi34g00057 288 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Sebi34g00057 288 Pfam DnaJ domain 64 124 IPR001623 -
Sebi34g00057 288 Gene3D DnaJ domain 62 161 IPR036869 -
Sebi34g00057 288 PANTHER BNAC03G44070D PROTEIN 137 229 - -
Sebi34g00057 288 SUPERFAMILY Chaperone J-domain 62 127 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi34g00057 Sebi-Chr34 2823391 2824689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi34g00057 6 128 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 37.795 4.95e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi34g00057 - - mnt:21400438 187.578