Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi34g00050 ATGGCTTCTTTCCCAAGCTTCAATATTGAAACCCAAATTCCAGCAGAGCTTCTGATAGCTCAAATCATGCAACTTCATGCAACCATCTCTAAGCTCGAATCTCTTAGGCCTTCTAAGCAAGTCAATAGTCTTTTCACTCAACTTGTCAAACTATGCACCCTCCCTTCATCCATTGACATTGAGGCCTTACCCCAAGAGGTGCAGAGCATGCGTGAGAGCCTCATTAACCTTTGTGGCCGTGCTGAAGGGCTTTTGGAACTTGAATTTTCAACTTTCATTAGCCACACACCCAACCCATTGAAAAATCTAACTCTGTTTCCATACTATGGGAACTATATCAAACTAGCAAACATGGAGAACAAAATCCTCAAAGAAAATGGTGTGGTGCATCCAAAGAAAGTAGCTTTTGTAGGGTCAGGTCCAATGCCACTCACTTCCATCATAATGGCCACTCATCACATGGACACCACCCACTTTGATAACTTTGACATTGATGAGAAGGCCAATGAGGTGGCTCGAAAGATTGTTGCTTCAGATGCAGCACTTGAGAAGAGGATGAAGTTTGAGACACAAGATATCATGGAAGTTAGAGAGAGGTTGGGGCAATATGATTGCATCTTTTTGGCAGCACTTGTGGGTATGAGCAGAGAAGCAAAATTGAAGATTTTGGGTCACATAAGAAAGTATATGAAGGAGGGAAGTGTTTTGCTTGTGAGGAGTGCAAAAGGGGCTAGAGCATTTTTGTACCCTATAGTTGAGGAACATGACATGGTGAATTTTGAGGTGCTTACCATATTTCATCCCACAAACGATGTGATCAATTCAGTTGTTCTTCTTCGCAAGCCTAAAGCTTAG 855 0.4234 MASFPSFNIETQIPAELLIAQIMQLHATISKLESLRPSKQVNSLFTQLVKLCTLPSSIDIEALPQEVQSMRESLINLCGRAEGLLELEFSTFISHTPNPLKNLTLFPYYGNYIKLANMENKILKENGVVHPKKVAFVGSGPMPLTSIIMATHHMDTTHFDNFDIDEKANEVARKIVASDAALEKRMKFETQDIMEVRERLGQYDCIFLAALVGMSREAKLKILGHIRKYMKEGSVLLVRSAKGARAFLYPIVEEHDMVNFEVLTIFHPTNDVINSVVLLRKPKA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi34g00050 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Sebi34g00050 284 PANTHER NICOTIANAMINE SYNTHASE 3 15 282 IPR004298 GO:0030410|GO:0030418
Sebi34g00050 284 CDD AdoMet_MTases 162 238 - -
Sebi34g00050 284 Gene3D Vaccinia Virus protein VP39 17 283 IPR029063 -
Sebi34g00050 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Sebi34g00050 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 240 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi34g00050 Sebi-Chr34 2531332 2532186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi34g00050 17 281 Nicotianamine Synthase Gene Family AT5G56080 52.416 1.17e-95 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi34g00050 K05953 - gmx:100819726 498.819