Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi34g00043 ATGAGCAAGATGAATATGGTGATGGATTTTCATAGGAGGAACTTTAGTTGCGAGTTTAAGCTAGAGATGCTACAGGGGATCATAGCTACGAAGTTGAACCACGATGGAAGATGGATCAAGTCATACATAATTTATGTGGCATCTTCTGCTGGTCCAAAGTCCAGTGCCAATCAACTGTTTGTAGAATTGCCTCGGAGGGAAAAGGGCAAAAGGCCATTTGAAAAGGAAAAAAATAGAGGTACGAGGAAGAGGAACGTAGGCTGTTGTATTGTTATGGCAAATAGGAGCACCAGCTTAGTGCTTCCTCACGGGTCAATGTTGCCACATGAACCAGTGGCTCCTCTACCGAGACCTGTGAGGCTATCTGCAAGCTTTCATTCGTTTTCCGCAACATTGGCTGTAACCAATAGAGCCCTCCATGTCTCCCTAGGAAGTTGGGGCTGTGGAGCTTCTTCTTCTTGTTGCTGCTTCCGATTCAAGAGACGCAGCTGCAAGTGGAAACGGCTTGTAAGAAGCTGCTCCACCAGTGAGTTTGTTATTGCTAGTGATGAAAACTATGGCAATAAACAGGTTGTTAGTCTCACTCCACGCCTGTATGATTATGTCCTAAAAAATGTTCGAGAACCAGAGATTCTAAAGCGACTTCGAGAGGAGACTGCTTCTATGCGTGGAAGTCAGATGCAGGTGTCTCCTGATCAGGCACAACTGCTTGCAATGCTTGTACAGATTCTTGGAGCAGAACGGTGTATTGAAGTTGGTGTTTATACTGGTTACTCGTCATTAGCCATAGCATTAGTCCTGCCAGAATCAGGTCATTTAGTTGCCTGTGAAAGAGATGCCAAATCTCTTGATGTTGCCAAGAAGTATTATCAGTTAGCTGGTGTTTCACACAAGGTGGATGTAAAACTTGGACTTGCAGCAGATTCCCTAGAATCTCTAATTCTGAATGGAGAAACAGGAAGCTATGATTTTGCATTTATTGATGCTGAGAAAAGGATGACTGAGAAATATTTTGAACAGCTACTACAACTGGTGAGGGTTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCATGGAAAAGTTGCTGATCCAATGGTAAGTGACTCTAAAACTATCAGCATTAGAAATTTTAATCAACAGTTAATGGAAGACAAGCGTGTAAACATCAGTATGGTACCTATAGGAGACGGGATGACAATCTGCCGTAAAAGATGA 1218 0.4286 MSKMNMVMDFHRRNFSCEFKLEMLQGIIATKLNHDGRWIKSYIIYVASSAGPKSSANQLFVELPRREKGKRPFEKEKNRGTRKRNVGCCIVMANRSTSLVLPHGSMLPHEPVAPLPRPVRLSASFHSFSATLAVTNRALHVSLGSWGCGASSSCCCFRFKRRSCKWKRLVRSCSTSEFVIASDENYGNKQVVSLTPRLYDYVLKNVREPEILKRLREETASMRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGHLVACERDAKSLDVAKKYYQLAGVSHKVDVKLGLAADSLESLILNGETGSYDFAFIDAEKRMTEKYFEQLLQLVRVGGLIVIDNVLWHGKVADPMVSDSKTISIRNFNQQLMEDKRVNISMVPIGDGMTICRKR 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi34g00043 405 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 203 405 IPR029063 -
Sebi34g00043 405 PANTHER O-METHYLTRANSFERASE-RELATED 188 404 - -
Sebi34g00043 405 Pfam O-methyltransferase 206 404 IPR002935 GO:0008171
Sebi34g00043 405 Gene3D Vaccinia Virus protein VP39 180 405 IPR029063 -
Sebi34g00043 405 CDD AdoMet_MTases 248 353 - -
Sebi34g00043 405 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 188 405 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi34g00043 Sebi-Chr34 2444469 2449570 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi34g00043 162 393 Monolignol Biosynthesis Gene Families AT3G62000 75.424 1.92e-127 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi34g00043 - - gmx:100776619 501.13