Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi349g00029 ATGGGAGGTTTGCATCTGGGTTCAAAGGGCCATGTGGTAGGAAAAGAAACTGATTATGTTCAGCAAGGTAGTTGTCCCTTTGTTTTGGAGGATGATGGGGGAGGTGTCTATGTTGTAGATGAGAATTGTGGCAATAGCTGTGCAGTAGAGGGTGTGGAACATAGTGGTGGTCCACATTTATCAGATGATAATGGTGCATCTGGCGAAGGTTATTATTGTGACGGTGAAAATGAGGGTGTTTTTTTGGTGGGAGAAGATTGGAATGATGAAAACTTGGAAGGTGATGGGGATAATGGTGGAGAGGATAAAATTTTAGTTGATACAAATGATGATATACTTAAGATGGGTGACCTATCCTTGTTTAGTCCTCATGAAATAGAGAGATATGAATTTGGAAGTGTTGACATAGCATACAAGTTTTATTTTGAATATGGGTTTGCTAATGGGTTTGGGATACGAAAGGGTCGTACTTTGAAAAGTAATAAAACTTCGGAAGAGTATCAGAAAGAGTTAATGTGTTGTAGAGCTGGGCAGCGTGAAAACCATGGTCTTAAAATGGAAGATAGGGTCCGTGAGCCTAGAGCTTTGACTAGGTGTGATTGTAAGGCCAGATTTCATGTTCGTGTCAATCAGTTAAGTGGTAGGTGGTTTTGTATTTGTTTCAAAGATGATCACAACCATGATCGTCTCGGTGCAGTGCATTGCAGCATGCTTCCAGTGTACAGAAAAATGTCTGAGAGTGATGTGGTCCAAATGAACAACATGATGAAAGTTGGTTTTCGAAAGAAAGACATGTATAACAAGATTAGTGAGCAAAGGCGGAGTTCGTGTTCGGATGCTAAAGGAGCTTTGGAATACCTAGATTTCACCAAAGGATTTGAGGATTGCATGTTTGGTTATTATGATGTGGGAACGTTTAGAAGAAAGCGGTTGGAATTGATTGCAAAATGTGAACTTCAAGAGAACACATGGGTGGCTGTTTTATATGAGAAGAGGAATATGTGGGCTACAGCTTACCTTCGTGGAAAATTTTTTGGTGGTTTTAGAACTACGTCACAGTGTGAGGGATTGCATTCAGAACTTGGAAAATTTGTCAACTCACGTTACAATTTGAGTGACTTCTTGCAACATTTTCAGCGGTGCCTGAATCATATGCGTTTCAAAGAGAAGGAGGATGACTTTACATCAATTCATGGCTGTTCGGTGTACTATATTTTTAGTAGTCATCCAAACGGGAAGGAGTGTGGAATGGAGGGGATTGATGAGATCCCAGAAACATTGGTCCTTAAAAGGTGGAGCAAAGTTGTTAAGTATGGTTTAGGTTGTAAAGAATTTGAAGAAAATCATTGTGTTGATGTTGGCAGAAGGGCTGGGAAGGCTGCACTGGATGGTTTATATGACCATGTTAGTGATTTTAAGTCTGCAACCATGGAAATGTTTAAGGCTGAACGCGATAGACTTGTCGAGGATTGGAGGCAATGTCGGGCTGATTTTGATAGTGAACAACAGTTGGGAATAAGTGGTCCTAATTACACACATGATGGTCCAAGGAACCCAACACGTGCTTCAATCAAAGGTCATGCTGGTAGTTCCACATCTGCAGGCATCAGAACTAGGAAAAAACAAAATTGTTCCATATGTAAGCTACCAGGACACAACAAAGTCACTTGTCCTAGTAGTGACCAACACTGGCGTTATTCTCATGTTGACAGCGCTGGTGGCTCATCACAACAGAATGCTGCTGATGTTGTCGCTGATGAAGAATATGACTACTTTGACCCTGAAACTTGGTTGTGA 1797 0.4107 MGGLHLGSKGHVVGKETDYVQQGSCPFVLEDDGGGVYVVDENCGNSCAVEGVEHSGGPHLSDDNGASGEGYYCDGENEGVFLVGEDWNDENLEGDGDNGGEDKILVDTNDDILKMGDLSLFSPHEIERYEFGSVDIAYKFYFEYGFANGFGIRKGRTLKSNKTSEEYQKELMCCRAGQRENHGLKMEDRVREPRALTRCDCKARFHVRVNQLSGRWFCICFKDDHNHDRLGAVHCSMLPVYRKMSESDVVQMNNMMKVGFRKKDMYNKISEQRRSSCSDAKGALEYLDFTKGFEDCMFGYYDVGTFRRKRLELIAKCELQENTWVAVLYEKRNMWATAYLRGKFFGGFRTTSQCEGLHSELGKFVNSRYNLSDFLQHFQRCLNHMRFKEKEDDFTSIHGCSVYYIFSSHPNGKECGMEGIDEIPETLVLKRWSKVVKYGLGCKEFEENHCVDVGRRAGKAALDGLYDHVSDFKSATMEMFKAERDRLVEDWRQCRADFDSEQQLGISGPNYTHDGPRNPTRASIKGHAGSSTSAGIRTRKKQNCSICKLPGHNKVTCPSSDQHWRYSHVDSAGGSSQQNAADVVADEEYDYFDPETWL 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi349g00029 598 MobiDBLite consensus disorder prediction 503 517 - -
Sebi349g00029 598 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 288 460 IPR031052 GO:0006355
Sebi349g00029 598 MobiDBLite consensus disorder prediction 503 535 - -
Sebi349g00029 598 Pfam FAR1 DNA-binding domain 139 228 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi349g00029 Sebi-Chr349 669895 672530 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi349g00029 FAR1 1.3e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi349g00029 - - tpra:123914620 170.629