Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi348g00081 ATGGCAGTAAGCATTACATCTTCTCACACTGTCATTCCCTCCCACACTACTCCAAATGATACTGTGTTACTGTCTGAGAGTGAACAAATTAATGCTCACAATCATGCACTCACCATCTACATCTATAGGCCAAATCACAACCGCAATTTCAAAAACATTGTGGACACAATAAGACACTCTCTTAGCAAGATCTTAGTCCACTACTACCCTCTAGCTGGCAGGTTACACATCACAAGGGGTGGAAGATGGGAATTGGAGTGCAATGCAAAGGGTGTAAATCTATTGGAAGCTCAATCCACAAAAGCACTTGATGAGTATGGTGACTTTGAACCTAATGACACCATCACAGAGCTTATTCCTAAGGTTGATTATAGTGAACCTTTGGAGAATTTGCCACTGTTATTTGTGCAGTTAACAAAATTCACCTGTGGTGGCTTCTGTGTTGGCATTGCCATTTCCAATGTCTTAGTTGATGGAATTTCTGGCACTCTCTTTATTGATGCATGGGCTAAGGTTGCTCGAGGTGGTACTTTGGAGGATTGTGAGATGCCACTTCTGAACAGAACAGTTCTGAGATCAGAGACAAACTTCAACATGGCATCATCACCATGCTTTGACCATCCAGAGTTCAAGCCATTGCCACTTGTCCTAGGCAACACTGATGCCATGGTGGAGCTTGAGAAAGAGACAACTCTTGCAATACTCAAACTCACAAAGGATATGGTGGAGAAGCTGAGGAAGAAAGCCAATGAGTTTATGGAAGATGACAATCAGAGTCTGGGGAAGAGGGGAAGAAGAGCTTATAGCAGATATGAGAGCATTGGTGCTCATATATGGAGGTGTGCATGCAAGGCTCGCTTTGGTGATCACAATCAACCAACGGTGGTTTACATTGTTGCAGGTACCAGAAACAGATTGAAGCCACCTCTCCCTTCAAACTACTTTGGAAATGCCACACATCCAACTCTGACACCAACATCCTTCAGTGGGGACATTGTGTCAAAGCCTTTGAGCTATGGGGCACAAAAGATTAGGGAAGCAATTGAAGTGTTAACAGATGAGTATTTGAGGTCAGCGTTTGATTTTATTGGGAGTCAGAAAAATGTTGGGTGGCTAAGGCCATCCTTGAATAATGAAGGGATTGTGGAAGCCCCTTTTCTTGGGAATCCTAATCTTAACATATGGAGTTGGATGAGTAATATGCCAATGTATGGACCAGATTTTGGATGGGGAAAACCTGTATATATGGGTCCTGGTGCTGTGAAAGGAGATGGCAAGGCATTCATTATGCCAGGTCCATTAGATGATGGGTCTCTTTCCATAGCCATTCGTTTGCAAACTTCTCACATGGAAGTTTTCAAGGAGTACTTCTACAAGGACATATGA 1386 0.4307 MAVSITSSHTVIPSHTTPNDTVLLSESEQINAHNHALTIYIYRPNHNRNFKNIVDTIRHSLSKILVHYYPLAGRLHITRGGRWELECNAKGVNLLEAQSTKALDEYGDFEPNDTITELIPKVDYSEPLENLPLLFVQLTKFTCGGFCVGIAISNVLVDGISGTLFIDAWAKVARGGTLEDCEMPLLNRTVLRSETNFNMASSPCFDHPEFKPLPLVLGNTDAMVELEKETTLAILKLTKDMVEKLRKKANEFMEDDNQSLGKRGRRAYSRYESIGAHIWRCACKARFGDHNQPTVVYIVAGTRNRLKPPLPSNYFGNATHPTLTPTSFSGDIVSKPLSYGAQKIREAIEVLTDEYLRSAFDFIGSQKNVGWLRPSLNNEGIVEAPFLGNPNLNIWSWMSNMPMYGPDFGWGKPVYMGPGAVKGDGKAFIMPGPLDDGSLSIAIRLQTSHMEVFKEYFYKDI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi348g00081 461 Gene3D - 219 459 IPR023213 -
Sebi348g00081 461 Gene3D - 1 212 IPR023213 -
Sebi348g00081 461 Coils Coil 235 255 - -
Sebi348g00081 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 457 - -
Sebi348g00081 461 Pfam Transferase family 1 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi348g00081 Sebi-Chr348 1071410 1073205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi348g00081 1 459 Monolignol Biosynthesis Gene Families AT5G48930 36.819 1.47e-101 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi348g00081 K13065 - gmx:100779652 640.958