Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi348g00054 ATGGAGGTGCAAACTCCACCACAACCCACTCCTCCGCCGCCCCATCTCAACTTCCCTGACTCGCCAACTCCTCCCCTCGCTCGCGGAACACCGATTCATGGACGAGCCACACCCTCCCTCAACCACCACCACCAAGCTCCGCCTCATGTGCAGCTACGGCGGCCAAATTGTCCCTCGCCCCCACGACAAGTCCCTCTGTTACGTCGGCGGCGACACCCGCATCGTGCTCCAAACGAAGACCTAGATTCCCTTGTTTCCGTTACCACCGACGAAGACCTCGAAAACATGATCGACGAGTACGATCACCGAACCTCCTCCAAACCTTCCAGAATTCGCCTCTTCCTCTTCCCGATCCCAGCCCGACTTGGCCCAGACTATTGGGCCCGGGTCGGGCCCAGCAACGGCCAAGACAGAGGAACTGCACAAGAATTTGAAGCAGGGGCAGGAGGTTCAATCCGTGCCGGATTCGCCGATGCTGGAGACGAATTCGTCTTTCGGGTCTACTTCATCGTCGCCGTCGGTGGCGAATTTGCCGCCGATATAAAGGTTCGTGTGGAGGATGGCGGTAACGGTGGTGGTGAAATTAGGGCGCAGGATCAGAAGGTGGTGGGAATTGAGGAACAGTTTGCTCAATTGGGTGTTGGTGGTGTGGTGCAGAAGCAGGATGAGGGTTTTGGTGCGCTGTCTTCGAGCTCTGCCGCGACGGTTGTTGTCTCCGATGATGAGAGATCAGAGAATGGGGTCCCTGTGGGAAGTCAACCGGTGGTCTTTGATTTGCCTTCCCCTGATTCAGTTTCAAGTGATAGTAGTCTTTCAAATCCAATGTCACGCCCAAAACCTGTTATCTATCAAGACCAAGTTCAAATTCAATCTGGAACTTCATGGGTTCCTACTAGCTCTGTTGATCCCAAGCTTAATGTGTCTGATCAACATGGTCAGTTCCAGATGCATCAGCAACATGTTCATGACCGTGGATATGTGTTGCAACAACAGCAATTTGATCAGCAACAGCAGGCTCAACCCCAACAACAGTTTATACACGGCACACATTTAATTCACCAGCATACCCCTGCTTACTATACTGTATATCAGCATCAGCAGCAACAGCTCCATCCCCAGCATCCACCATCTGCTTGA 1137 0.5312 MEVQTPPQPTPPPPHLNFPDSPTPPLARGTPIHGRATPSLNHHHQAPPHVQLRRPNCPSPPRQVPLLRRRRHPHRAPNEDLDSLVSVTTDEDLENMIDEYDHRTSSKPSRIRLFLFPIPARLGPDYWARVGPSNGQDRGTAQEFEAGAGGSIRAGFADAGDEFVFRVYFIVAVGGEFAADIKVRVEDGGNGGGEIRAQDQKVVGIEEQFAQLGVGGVVQKQDEGFGALSSSSAATVVVSDDERSENGVPVGSQPVVFDLPSPDSVSSDSSLSNPMSRPKPVIYQDQVQIQSGTSWVPTSSVDPKLNVSDQHGQFQMHQQHVHDRGYVLQQQQFDQQQQAQPQQQFIHGTHLIHQHTPAYYTVYQHQQQQLHPQHPPSA 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi348g00054 378 MobiDBLite consensus disorder prediction 1 26 - -
Sebi348g00054 378 MobiDBLite consensus disorder prediction 259 277 - -
Sebi348g00054 378 PANTHER OS05G0427100 PROTEIN-RELATED 76 369 - -
Sebi348g00054 378 Pfam PB1 domain 77 117 IPR000270 GO:0005515
Sebi348g00054 378 SUPERFAMILY CAD & PB1 domains 78 117 - -
Sebi348g00054 378 MobiDBLite consensus disorder prediction 1 82 - -
Sebi348g00054 378 MobiDBLite consensus disorder prediction 238 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi348g00054 Sebi-Chr348 728461 730090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi348g00054 74 123 MAP Kinase Kinase Kinase AT5G57610 47.059 2.93e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi348g00054 - - lja:Lj0g3v0261769.1 189.119