Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi348g00047 ATGAAGCAGAGAATAACTATGAAACCCTTGTCCTTGTGTTCTCCCCTAATTATTCACTCATACACCACTCTCTTCTTTCTCCTAACCACAACCGCTTTCTCTTCCGTGGACCCCAAGTACCAAGCTTGCGAGCCCAAGACCTGCGGAAAAGGCCCAAACATAAGCTACCCTTTCTACATCAAAGGAAAACAAGAACCCTTCTGTGGGTACCCTCGTTTTGGGCTCACTTGTGGCGAAAATGGTTTCCCAATTCTCAACCGACGGAATAATACCCAATTCATCATCCACGAGATTTTCTACGAGAGCGAGTCACTTCGAGTCTCCATCCCCGCGTTCACCGATTGTGTTGCTCCAATGCGCAATCTCACCAGTTCCGGCAGGAGGTTCAGCGTTGCTCATAACCAAAAGGAAGTGTTGTTGTTCTATGGCTGCGACCTAACATCGCTTCCCAAAAGGATGCAGGAGAACACGATTGGGTGTTATGCAGGAAACAGAACGCGTTCGGTTGTGGCGTTGTATAGAGAGGACGCGAATTTGAGCATAGCAGCGAAGAATTGCGAGGGCAGAGTGGTGAATACGACGGTGGAAGGTGAGGTTGAGAAAGGAGGGATTAAAGAGGCGTTGCAGAGAGGGTTTGTGTTGAATTGGACAGCGAGTTATTGTGGCGATTGCAGCAATAGTGGAGGGAGGTGCGGGTTCGACTTAGACAAACGCATATACGCTTTCAGGTGCTACTGTCCAGATAGAGTTGATGCTACCAGATGTGATGTACCATCACCAATACAATCAGAGGAATATGGGACCCAAGCCACAAACATCTAA 822 0.4818 MKQRITMKPLSLCSPLIIHSYTTLFFLLTTTAFSSVDPKYQACEPKTCGKGPNISYPFYIKGKQEPFCGYPRFGLTCGENGFPILNRRNNTQFIIHEIFYESESLRVSIPAFTDCVAPMRNLTSSGRRFSVAHNQKEVLLFYGCDLTSLPKRMQENTIGCYAGNRTRSVVALYREDANLSIAAKNCEGRVVNTTVEGEVEKGGIKEALQRGFVLNWTASYCGDCSNSGGRCGFDLDKRIYAFRCYCPDRVDATRCDVPSPIQSEEYGTQATNI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi348g00047 273 Pfam Wall-associated receptor kinase C-terminal 176 248 IPR032872 -
Sebi348g00047 273 PANTHER OS01G0690200 PROTEIN 18 256 - -
Sebi348g00047 273 Pfam Wall-associated receptor kinase galacturonan-binding 43 107 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi348g00047 Sebi-Chr348 655881 656853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi348g00047 41 233 C3H Transcription Factor Family AT2G46495 24.876 6.76e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi348g00047 - - ahf:112803863 273.863