Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi348g00034 | ATGGCCACCACGCAAGCTAGTGGTGGCAGCGGCGGCGGCGTTGCCATAATGCCAGGCACTGTAACCTCCACGGATCCTTCCAGTTCGAGCACTTGCTCCAACACCTCCCTCCTCCTCCAATCGCCGATTCTCATATTCTCTTTGTTTCACAAAGCCATTAACTCTGAGCTCCAGTCCCTCCACCAAGCGGCCTTGGATTTCGTTTCCAACCACGATGATCCCTCTGACCTAAAATCCTTGTCCCACCGCTGTCACTTTCTTCGCACCATCTATAAGCACCACTGTAATGCCGAGGACCAGGTCATATTTCCTGCCTTAGATAAACGTGTGAAGAATGTTGCAAGCGCGTATTTTTTGGAACATGAGGGGGAGGGTCTTCTTTTCAATCAGTTGTTCGAGCTGCTAAATTCCAATTTGCTAAATGAAGAGAGCTATCGAAGAGAATTAGCTTCTTGTACTGGAGCCCTTCGAACATCAATTAGCCAGCATATGTTTAAGGAAGAGGAACAGGTCTTCCCTTTGGTCATTGAGAAATTTTCATCTGAAGAGCAGGCATCATTAGTATGGCAATTTCTTTGTAGCATACCAGTTAAAATGATGGCAGAATTTCTTCCCTGGCTTGCTTCATATATATCATCTGATGAGCATCAGGATCTACTTAGGTGCTTGTGCACAATTATTCCCAAAGAGAAGCTCCTTCATCAGGTCATCTTTGGATGGATGGAGGGACTAAACATTAAATGCACAAACTGCACGCATGATACTAAGGTTCAATGGCAGGATGCTGGAACAAGCAATTTACCCAGTCATAATAATGAAAAGGAGTACTGTGACTGTGGACCTTCCAAAACTGTCAAAAGGAAATGGGTGGAGCTAAGTGAAGATCCTAACAATTCCACTTTATCATGTCCTTTAGATGAATTATTACTTTGGCATAAGGCTATAAAGCAAGAATTGAGTGATTTAGCTGAGACAGCTAGGAAGATGCACCTATCTGAAGAATTTTCTGACTTGTCTTCATTTAATGGGAGGCTTCAATTTATAACTGAAGTCTGCATCTTTCATAGCATTGCTGAGGACAAAGTTATATTTCCCGCCATAAATTCAGAGCTGGATTTTTTCCAAAACCACACAAATGAAGAACTCCAATTTGACAATCTGAGGTGCCTGATAGAAGGTATCCAAAGTGCTGGAGCCAACCCCTCCTCCCCTGAGTTTTATATTAGGTTGAGCTCCCATACTGAACAAATAATGAAAACTGTACTGAAGCACTTTGAAAATGAGGAAGCTCAGGTTCTTCCACTTGCACGAAAGCTATTTAGCCACCAAAGGCAACGAGAATTACTTTATGAAAGCTTGTGCTTGATGCCCTTGAAATTGATCGAAAGCGTATTACCATGGTTAGTAGGATCACTTAGTGAAACAGAAGTTAGGTCGTTTCTTCAGAATATGTATATGGCAGCCCCGGCTTCAGATCATGCACTGGTTACCCTTTTTTCTGGTTGGGCATGCAACAGACATTCCAGAAACAGTTGCTTCTCTTCAAGTGTGATAGGTTTATGTCCTGCCAGGAGATTGATGGAGACGGAAAGCACTAGCCTATCATTTTGCATGTGTGAACCTTCATTCAGTCCCAATGAAAAATCTTCGCACGTTAAACAAGATGATGCAAATAGTGACATTGGACCAGTCAAGCATGGAAATCCAGAACCAAAGCAAGACAATGATGCTTCTAACTTGATGGTAACAAGAGAAACTCTTAACTCACCTAATAATCAGTCTTGCTGTGTCCCTGGATTAGGGGTGAACACAAATCATCTAGGAGGTGGTTCTTTTTCCCTAACAAAGTCTCTGCGAGCCTTATCTGATTGTCCATCTGCACCTTTCCTCAATTCCAGTCTTTTTATGTGGGAAACTGATGTAGTCTCTGTTGACAATCAATTTACAACAAGGCCTATTGATAACATATTTAAATTTCACAAAGCCATCCGTAAAGACTTGGAATATTTAGATGTTGAATCCGGAAAACTTAATGATTGTGATGATATTTTCATTCAGCAATTCACTGGTAGATTGTGCTTGTTGTGGGGTTTGTATAGAGCTCATAGTAATGCAGAAGATGATATAGTATTTCCAGAATTAGAGTCAAAAGAGAATCTTCACAATGTGAGCCATTCTTACACTTTGGACCACCAGCAGGAAGATAAGTTATTTTTGGATATTTCTTCTGGACTCACCCAGCTTACTCGATTACATGAATTACTAAATAAAAGGATTTCGTCTGACCATCTAATCAACTGTTACCCTAATTATGCTGATTGCTCTGATACCATACAAAATTATAACGAGCTCTCTACAAAGATTCAGGGCATGTGCAAGTCTATCAGAGTGACACTAGATCAACATCTTCTTAGGGAGGAACTTGAATTATGGCCCTTGTTTGATAAACACTTTTCTGTGGAAGAACAAGATAAGATTGTTGGTCGTATAATTGGTACTACAGGGGCAGAGGTTCTCCAATCAATGTTGCCATGGGTAACTACTGCTCTCACACAAGATGAGCAAAACAAAATGATAGACACATGGAAACAGGCTACCAAAAACACTATGTTCAATGAGTGGCTTAATGAGTGGTGGGAAGGACCTGCTTCATCTTCAAATATCACTACACCTCGAGACCATTCACTAGGTACTGATGCCTATGAAGACTCAGAGCATAGCTTTCAAGCCTTCAGGCCTGGATGGAAAGATATATTCAGGATGAACCAGAATGAACTTGAATCAGAAATAAGAAAAGTTTCTCGAGATTCAACTCTTGATCCAAGAAGAAAAACATATCTAATTCAAAATCTAATGACCAGTCGCTGGATAGCTTCTCAGCAGAAGTCATCTCAAGCAACAGGAGGTGAATCTTCTAAATTAAAAGATTTGTTGGAAACTTCTCCTTCATTTCGTGATCCAGAGAAAAAATCCTTTGGTTGCGAACATTACAAAAGAAATTGTAAACTCCGTGCTGCCTGCTGTGGAAAGCTATTCACGTGTAGGTTCTGCCATGACAAAGTTAGCGACCATTCAATGGATAGGAAGGCTACGACTGAGATGATGTGCATGCGCTGCCTTCAAATACAGCCTGTTGGACCAGTTTGTGTAACACCTTCCTGTGGTCGTCTCTTAATGGCAAAGTACTACTGTAGTATTTGCAAATTTTTTGATGATGAAAGGACAGTTTATCATTGCCCTTTCTGCAATCTATGCCGTCTGGGAAAGGGACTTGGTGTTGACTTCTTTCATTGCATGCAGTTGCATCTGTCAGAGCTCTCCCTTGTGGTCATTTCATGCATTCCGCTTGCTTTCAGGCATATACATGCAGTCACTACATCTGTCCTATTTGTAGCAAATCTTTGGGGGATATGGCGGTTTACTTTGGCATGCTTGACGCTCTACTGGCTTCTGAGGAACTCCCAGAAGAATATCGGAATCGATATCAGGATATACTCTGTAATGACTGCCATAAGAAGGGGACTGCTCCATTCCATTGGCTATATCACAAATGTGGGTTTTGCGGATCTTACAACACAAGGTTAA | 3585 | 0.4139 | MATTQASGGSGGGVAIMPGTVTSTDPSSSSTCSNTSLLLQSPILIFSLFHKAINSELQSLHQAALDFVSNHDDPSDLKSLSHRCHFLRTIYKHHCNAEDQVIFPALDKRVKNVASAYFLEHEGEGLLFNQLFELLNSNLLNEESYRRELASCTGALRTSISQHMFKEEEQVFPLVIEKFSSEEQASLVWQFLCSIPVKMMAEFLPWLASYISSDEHQDLLRCLCTIIPKEKLLHQVIFGWMEGLNIKCTNCTHDTKVQWQDAGTSNLPSHNNEKEYCDCGPSKTVKRKWVELSEDPNNSTLSCPLDELLLWHKAIKQELSDLAETARKMHLSEEFSDLSSFNGRLQFITEVCIFHSIAEDKVIFPAINSELDFFQNHTNEELQFDNLRCLIEGIQSAGANPSSPEFYIRLSSHTEQIMKTVLKHFENEEAQVLPLARKLFSHQRQRELLYESLCLMPLKLIESVLPWLVGSLSETEVRSFLQNMYMAAPASDHALVTLFSGWACNRHSRNSCFSSSVIGLCPARRLMETESTSLSFCMCEPSFSPNEKSSHVKQDDANSDIGPVKHGNPEPKQDNDASNLMVTRETLNSPNNQSCCVPGLGVNTNHLGGGSFSLTKSLRALSDCPSAPFLNSSLFMWETDVVSVDNQFTTRPIDNIFKFHKAIRKDLEYLDVESGKLNDCDDIFIQQFTGRLCLLWGLYRAHSNAEDDIVFPELESKENLHNVSHSYTLDHQQEDKLFLDISSGLTQLTRLHELLNKRISSDHLINCYPNYADCSDTIQNYNELSTKIQGMCKSIRVTLDQHLLREELELWPLFDKHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTTALTQDEQNKMIDTWKQATKNTMFNEWLNEWWEGPASSSNITTPRDHSLGTDAYEDSEHSFQAFRPGWKDIFRMNQNELESEIRKVSRDSTLDPRRKTYLIQNLMTSRWIASQQKSSQATGGESSKLKDLLETSPSFRDPEKKSFGCEHYKRNCKLRAACCGKLFTCRFCHDKVSDHSMDRKATTEMMCMRCLQIQPVGPVCVTPSCGRLLMAKYYCSICKFFDDERTVYHCPFCNLCRLGKGLGVDFFHCMQLHLSELSLVVISCIPLAFRHIHAVTTSVLFVANLWGIWRFTLACLTLYWLLRNSQKNIGIDIRIYSVMTAIRRGLLHSIGYITNVGFADLTTQG | 1194 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi348g00034 | 1194 | PANTHER | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 695 | 1104 | - | - | |
Sebi348g00034 | 1194 | MobiDBLite | consensus disorder prediction | 959 | 988 | - | - | |
Sebi348g00034 | 1194 | Gene3D | nmb1532 protein domain like | 648 | 877 | - | - | |
Sebi348g00034 | 1194 | Gene3D | nmb1532 protein domain like | 41 | 193 | - | - | |
Sebi348g00034 | 1194 | Gene3D | nmb1532 protein domain like | 308 | 451 | - | - | |
Sebi348g00034 | 1194 | Pfam | CHY zinc finger | 994 | 1069 | IPR008913 | GO:0008270 | |
Sebi348g00034 | 1194 | CDD | Hr-like | 656 | 812 | - | - | |
Sebi348g00034 | 1194 | CDD | Hr-like | 45 | 173 | - | - | |
Sebi348g00034 | 1194 | ProSiteProfiles | Zinc finger CTCHY-type profile. | 1059 | 1121 | IPR017921 | - | |
Sebi348g00034 | 1194 | MobiDBLite | consensus disorder prediction | 545 | 577 | - | - | |
Sebi348g00034 | 1194 | FunFam | Zinc finger protein BRUTUS | 647 | 877 | - | - | |
Sebi348g00034 | 1194 | Pfam | Hemerythrin HHE cation binding domain | 46 | 175 | IPR012312 | - | |
Sebi348g00034 | 1194 | Pfam | Hemerythrin HHE cation binding domain | 652 | 813 | IPR012312 | - | |
Sebi348g00034 | 1194 | SUPERFAMILY | CHY zinc finger-like | 987 | 1050 | IPR037274 | GO:0008270 | |
Sebi348g00034 | 1194 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Sebi348g00034 | 1194 | ProSiteProfiles | Zinc finger CHY-type profile. | 987 | 1056 | IPR008913 | GO:0008270 | |
Sebi348g00034 | 1194 | MobiDBLite | consensus disorder prediction | 959 | 978 | - | - | |
Sebi348g00034 | 1194 | CDD | Hr-like | 306 | 434 | - | - | |
Sebi348g00034 | 1194 | SUPERFAMILY | Zinc hairpin stack | 1060 | 1100 | IPR037275 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi348g00034 | Sebi-Chr348 | 534593 | 544458 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi348g00034 | 41 | 1099 | C2H2 Transcription Factor Family | AT3G18290 | 59.387 | 0.0 | 1236 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi348g00034 | K16276 | - | gmx:100783072 | 1774.21 |