Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi348g00013 ATGGGGGCAAATGGGCTGGCAGAGATTCGTGACCCATTCAAGGGTCAACGCCAATGGTTAGGAACCTACAACACTGCTGAAGAGGCTTCACAAGCCTATGAGAACAAAAGGCTTGAATTTGAAGCTAGGGCCAAGGCTCTATCTGATGAGAAGACTTCTGTATCAGACTCCAAGTCTGCTGCTTTGGAGGACTCAGAGAGTGCCTTGTCACACACATCACCTCCTTCTGTGCTGGAATTGGATACCTCAGCTTCCAATTTGATTGAGAGTGGTAAGGTTTCAACCAACGAAGCTGCTGAAACCTCTGCTTTGGAGGCTGCTGAGACCATTGGTTTGGAGGCTGAATTTGCCAAGCTGGAAATGCCAGATTTTAGCCTTTTGAACATTCCATCACCATCTGCTGTTGCTGCAGCCACTCCATCTCGGTTTGGATTGGATTGGTTGGCCGTTGATGGTTTTGAACAGGGCTAA 471 0.482 MGANGLAEIRDPFKGQRQWLGTYNTAEEASQAYENKRLEFEARAKALSDEKTSVSDSKSAALEDSESALSHTSPPSVLELDTSASNLIESGKVSTNEAAETSALEAAETIGLEAEFAKLEMPDFSLLNIPSPSAVAAATPSRFGLDWLAVDGFEQG 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi348g00013 156 MobiDBLite consensus disorder prediction 53 83 - -
Sebi348g00013 156 Gene3D AP2/ERF domain 6 48 IPR036955 GO:0003700|GO:0006355
Sebi348g00013 156 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 7 94 - -
Sebi348g00013 156 ProSiteProfiles AP2/ERF domain profile. 1 50 IPR001471 GO:0003700|GO:0006355
Sebi348g00013 156 Coils Coil 23 50 - -
Sebi348g00013 156 MobiDBLite consensus disorder prediction 46 83 - -
Sebi348g00013 156 SUPERFAMILY DNA-binding domain 7 40 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi348g00013 Sebi-Chr348 121477 122038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi348g00013 7 127 AP2-EREBP Transcription Factor Family AT1G68550 41.538 1.20e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi348g00013 - - gmx:102667919 168.703