Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi347g00004 ATGGCATCAGATAGCCACTCACCACCTCTGGAGATATTAGTTCGAGGGCCAGAAGAGTTCTCACTCTGGACTGGACCCCCGTTTGCCAATGGTCAACCTGGTGTCAAGCTTGAAAAAGTTAATTGCATGAATGCAAAATTCAGTGATGATGGATCTAGACTTATGGTGATGAAATCCAACTCTGTGATTAGTGTATATGATTGCAAAAGTGCTAAAGAGATTAGGTCTTTTGAAGTGCCCAATGTTGTAGCTGCTATCCTGTCACCCCGTGGAACGTATTTGCAAACCTTCAAAAAACCTGCGCCGCAAGAAAAGAATGTGACTCTGTGGAAAACAGAGACCGGTGATCCTGTTTACCAACACTCCCAAAAGAACCTGACAAAAACCAATTGGCCTGCAATTCAGTTCAGTTCTGATGAAGCTACTGCATGCCGAATGGCAACTAATGAGGTGCAATTTTTTGACACCGGGGATTTCTCTAAAGGAGTTATCCATCGGTTAAAAGTTCCAGGAGTTGCTGCCATTGAGCTTTCTAGCACGCCTGGGTCTCATGTAGCTGCATTTGTTCCAGAATCCAAGGGAAAGATGGACCTATTCATGATGCTCACTGTTATGCCTGCTAAAGCAACTGTGTTTGACAAGAAGTGCAATCCTCTACTGGAACTTGGAACTGGTCCTTACAACACTCTTCGATGGAACCCAAAAGGGAAATTTTTATGTTTGGCTGGATTTGGTAACTTGCCTGGTGATATGGCATTCTGGGATTACGCAGAGAAGAAACAGCTTGGAACAACTAAGGCTGAATGGTCTGTGACAAGTGAATGGTCTCCAGATGGGTGCTATTTCATGACAGCGACAACAGCTCCAAGGCTTCAAGTTGACAATGGGATCAAGATTTTTCACTATAATGGGTCATTGTACTTCAAGAAGATGTTTGACAAGTTGTACCAGGCTGATTGGAAACCAGAGTTACCAAGTCAAGGACCAAAACCAACCCAAGCTTCTATAAAAGCCTCTTCTGCTTCTTCTGCCAACCCCCCTGCACAAAAACCTGCTGCATATCGCCCACCACATGCTAAGAATGCAGCTGTTATTCAGGCAGAGGGGGCATTGGTCGGCGTGATGGAAAGAGTAGCCAAGCTCTATCACTGTCTTGGTGCGCTGAATTTACTTGATAAGGATGGAGATTGTGGCTGCTTTCAAAGCACAGAGGAAGAAGAAAAACTTAAATGCAACTCCAGGGACTTAAGTGAAATAAACTTTGGGAACCAATTGTTTGGAGAGAGCCCTTCAGAACCAATGAGCAAGAATGCTTTACGAAACAAGAAAAAGAGGGAGAAACAGAAGGAGAAAAAGGCTGCTGCTGATGGCAGTTCTTCGTGA 1383 0.4432 MASDSHSPPLEILVRGPEEFSLWTGPPFANGQPGVKLEKVNCMNAKFSDDGSRLMVMKSNSVISVYDCKSAKEIRSFEVPNVVAAILSPRGTYLQTFKKPAPQEKNVTLWKTETGDPVYQHSQKNLTKTNWPAIQFSSDEATACRMATNEVQFFDTGDFSKGVIHRLKVPGVAAIELSSTPGSHVAAFVPESKGKMDLFMMLTVMPAKATVFDKKCNPLLELGTGPYNTLRWNPKGKFLCLAGFGNLPGDMAFWDYAEKKQLGTTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQADWKPELPSQGPKPTQASIKASSASSANPPAQKPAAYRPPHAKNAAVIQAEGALVGVMERVAKLYHCLGALNLLDKDGDCGCFQSTEEEEKLKCNSRDLSEINFGNQLFGESPSEPMSKNALRNKKKREKQKEKKAAADGSSS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi347g00004 460 Gene3D - 29 301 IPR015943 GO:0005515
Sebi347g00004 460 MobiDBLite consensus disorder prediction 422 460 - -
Sebi347g00004 460 SUPERFAMILY DPP6 N-terminal domain-like 41 303 - -
Sebi347g00004 460 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 204 455 IPR011387 GO:0003743|GO:0006413
Sebi347g00004 460 Coils Coil 436 456 - -
Sebi347g00004 460 MobiDBLite consensus disorder prediction 328 347 - -
Sebi347g00004 460 FunFam Eukaryotic translation initiation factor 2A 30 184 - -
Sebi347g00004 460 Pfam Eukaryotic translation initiation factor eIF2A 182 318 IPR013979 -
Sebi347g00004 460 MobiDBLite consensus disorder prediction 422 436 - -
Sebi347g00004 460 MobiDBLite consensus disorder prediction 323 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi347g00004 Sebi-Chr347 166610 172356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi347g00004 59 326 Eukaryotic Initiation Factors Gene Family AT5G27640 25.000 2.18e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi347g00004 K15026 - gmx:100811589 335.495