Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi346g00055 ATGGGGAGGAAGGGAAATTGGTTTTCCTCTGTGAAGAAAGCTCTCAGCCCTGAGTCAAAGGAGAAGAAAGAACAGAAATCAAGTGGATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAGAATCATACTCAGACACGGATAGAGCACCTCCTCTTCCTCCACCTGAAGAGATTATTTTAACTCATGTTGAGGATGAAAACAGTCATGATCATAATCATGTTGAAGTTGCAACTGCTATAGATGCTGAGAGGCCTGTTCCTGCTGTTCAGACAGAAGTTGCTGAGGTTCAAGCCACTATAATTGTTCAGCCTGCCTGTAAACCAAAGGATGAAGTGGCAGCAATCAAGATTCAAACAGCTTTTCGGGGATACATGGCAAGAAGAGCATTGCGGGCTTTAAGGGGGCTGGTCAGGTTGAGATCACTGATGGAAGGGCCAGTGGTCAAACGACAAGCCATCAGTACCCTCCGCTCTATGCAGACATTAACTCATGTGCAATCTCAGATTCGTTCTAGGAGGCTCAGGATGTTAGAGGAGAACCAAGCTCTGCAAAAGCAGCTCCTACAGAAGCACACAAAAGAACTAGAGAGCCTGCGGATTGGGGAGGAATGGGATGACAGCCTACAATCGAAAGAACAAATTGAAGCCAAGTTACTAAGCAAGTATGAGGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGCAAAACGGGAAGAACTCATTGAGATCTATGAACCCAATGTTCATGGATCCAACCAATCCTACCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCGCGGCCTTGGGAGAGCCATAGCCAGATGGAGAAAGACAAGAATGACCATTCATCTGTAAAAAGTTCAAGCCGCGCCATTACCAGTGCTGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCTGAAAGGAATTCTCCAACTGCCAGCCAAACTCCAGGCTCACCTAACTTCCAGTCCAATTCAACTCCTTCCAAGCCAGCAGTTGGTAAGAAAGTGAAGAAGGCAAGTCCAAAGGACAACTTGGTTATGGATGATGACACCAAAAGCATGGTGAGTGTGCAGTCAGACAGGCTCCGGAGGCACTCCATTGCTGGATCAATAGTGAGAGATGATGAAAGCCTTGCAAGCTCTGCATCAGTTCCAAGTTACATGGTGCCAACTAAATCTGCAAAAGCTAAGTCCAGGATGCAAAGTCCATTAGCTCCTGCAGAGAATGGAACACCAGAGAAGGGGTCCTTTGGGACTGCAAAGAAACGGCTCAGTTTCCCAGCTTCACCTGCCAGACCAAGGCGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTGAATGCAGAAATCACTGTTGGCAATGGTGTGGCTGCTTGA 1413 0.4671 MGRKGNWFSSVKKALSPESKEKKEQKSSGSKKKWFGKQKLQTSESYSDTDRAPPLPPPEEIILTHVEDENSHDHNHVEVATAIDAERPVPAVQTEVAEVQATIIVQPACKPKDEVAAIKIQTAFRGYMARRALRALRGLVRLRSLMEGPVVKRQAISTLRSMQTLTHVQSQIRSRRLRMLEENQALQKQLLQKHTKELESLRIGEEWDDSLQSKEQIEAKLLSKYEAAMRRERAMAYSFSHQQNGKNSLRSMNPMFMDPTNPTWGWSWLERWMAARPWESHSQMEKDKNDHSSVKSSSRAITSAEISKSFARFQLNSERNSPTASQTPGSPNFQSNSTPSKPAVGKKVKKASPKDNLVMDDDTKSMVSVQSDRLRRHSIAGSIVRDDESLASSASVPSYMVPTKSAKAKSRMQSPLAPAENGTPEKGSFGTAKKRLSFPASPARPRRHSGPPKVESSLNAEITVGNGVAA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi346g00055 470 MobiDBLite consensus disorder prediction 280 300 - -
Sebi346g00055 470 MobiDBLite consensus disorder prediction 1 59 - -
Sebi346g00055 470 Pfam Protein of unknown function (DUF4005) 329 448 IPR025064 -
Sebi346g00055 470 PANTHER IQ-DOMAIN 5-RELATED 1 451 - -
Sebi346g00055 470 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Sebi346g00055 470 MobiDBLite consensus disorder prediction 316 342 - -
Sebi346g00055 470 Gene3D - 91 139 - -
Sebi346g00055 470 MobiDBLite consensus disorder prediction 316 359 - -
Sebi346g00055 470 MobiDBLite consensus disorder prediction 15 31 - -
Sebi346g00055 470 Pfam IQ calmodulin-binding motif 116 134 IPR000048 GO:0005515
Sebi346g00055 470 MobiDBLite consensus disorder prediction 280 294 - -
Sebi346g00055 470 MobiDBLite consensus disorder prediction 34 49 - -
Sebi346g00055 470 Coils Coil 177 197 - -
Sebi346g00055 470 SMART iq_5 112 134 IPR000048 GO:0005515
Sebi346g00055 470 MobiDBLite consensus disorder prediction 402 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi346g00055 Sebi-Chr346 799298 802314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi346g00055 1 470 IQD Protein Family AT5G03040 51.875 6.65e-144 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi346g00055 - - gmx:100799058 695.656