Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi346g00048 ATGGACATTCAAAGCCAACTTGAGGTGAAGTATTACTCGGACAGTTGCCCAAAAGCGGAAGAGATAATCAAGCAACAAGTCATCCAGCTATACAACAAGCATGGAAACACAGCCGTTTCATGGGTTAGAAATCTCTTCCACGATTGCATAGTCAAGTCATGCGACGCATCCCTATTGTTAGCGACGGTGGGCGATGTAGTGTCGGAGCAGACATCGGAGAGAAGTTTTGGGATGAGAAACTTCAAGTACATTAACACCATCAAAACCGCCCTTGAGAAAGAATGCCCCTTGACAGTTTCATGCGCTGACATTGTTGCTCTTTCTGCTAGAGATGGCATTGTCATGTTGGGAGGTCCAAGGATCGAAATGAAGACAGGGCGAAAGGATAGCAAGGAAAGCTATACAACGGTGCTGGAAAACTTCATTCCCAATCACAATGACTCCATTTCCTTGGTGCTTTCTCGTTTTCAAGCCATTGGCATTGACACTCAAGCCACAGTCGCTCTTTTAGGAGCACACTCGGTGGGAAGAGTTCATTGCATGAATCTGGTGCACAGGCTATACCCTACTGTAGATGAAACGCTGGACCCTGCACATGCAGAGTACCTGAAACGACGGTGCCCAACACCAAATCCGGATCCAAAGGCTGTGTTATATGCGAGGAATGACCTGAAAACGCCGATGATAATTGACAACAACTACTACAAGAACATATTGCAACACAAGGGACTGTTGACTGTGGATGAAGAACTGGCTACTGACCCAAGAACCGCACCTTATGTCCAAAAGATGGCAGATGACAATGAATACTTCTACCAACAATTCTCAAGGGCCATTCTCTTGTTATCGGAGAACAATCCTCTCACCGCAGATCAAGGTGAAATCAGAAAGGATTGTCGCTTTGTCAATGTCAATTAG 918 0.4564 MDIQSQLEVKYYSDSCPKAEEIIKQQVIQLYNKHGNTAVSWVRNLFHDCIVKSCDASLLLATVGDVVSEQTSERSFGMRNFKYINTIKTALEKECPLTVSCADIVALSARDGIVMLGGPRIEMKTGRKDSKESYTTVLENFIPNHNDSISLVLSRFQAIGIDTQATVALLGAHSVGRVHCMNLVHRLYPTVDETLDPAHAEYLKRRCPTPNPDPKAVLYARNDLKTPMIIDNNYYKNILQHKGLLTVDEELATDPRTAPYVQKMADDNEYFYQQFSRAILLLSENNPLTADQGEIRKDCRFVNVN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi346g00048 305 FunFam Peroxidase 10 151 - -
Sebi346g00048 305 CDD secretory_peroxidase 6 302 IPR033905 GO:0004601|GO:0042744
Sebi346g00048 305 Gene3D - 10 303 - -
Sebi346g00048 305 SUPERFAMILY Heme-dependent peroxidases 6 303 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PRINTS Plant peroxidase signature 117 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PRINTS Plant peroxidase signature 221 236 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PRINTS Plant peroxidase signature 16 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PRINTS Plant peroxidase signature 164 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PRINTS Plant peroxidase signature 40 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PRINTS Plant peroxidase signature 79 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PRINTS Plant peroxidase signature 98 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PRINTS Plant peroxidase signature 237 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 ProSiteProfiles Plant heme peroxidase family profile. 6 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PANTHER - 4 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 Pfam Peroxidase 24 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 Gene3D Peroxidase, domain 2 143 282 - -
Sebi346g00048 305 FunFam Peroxidase 143 282 - -
Sebi346g00048 305 PRINTS Haem peroxidase superfamily signature 117 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PRINTS Haem peroxidase superfamily signature 165 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PRINTS Haem peroxidase superfamily signature 38 52 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi346g00048 305 PRINTS Haem peroxidase superfamily signature 99 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi346g00048 Sebi-Chr346 700809 702392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi346g00048 9 303 Peroxidase AT2G37130 74.662 7.14e-172 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi346g00048 K00430 - gmx:100785485 540.806