Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi346g00046 ATGAGCGTCATCGACATTCTAACCAGAGTCGATACCATTTGCAAGAAGTACGACAAATACGATGTCGAAAAGCACAAGGATTCCAATCTCGCCGGCGACGATGCCTTTGCCAGACTCTACGCCAGTGTCGACGCCGACATTGAGGCCCTGCTTCAGAAAGCAGAAACCGCTTCCAAGGATAAAGGTAGGGCTTCTGCTGTAGCGATCAATGCGGAGATTCGTCGTACCAAGGCTCGGTTGCTGGAGGAGGTCCCCAAATTACAGAAGTTGGCTATGAAAAAGGTAAAGGGGCTTTCATCGCAAGAATTTGCTGCCCGTAATGATTTGGTTCTTGCATTGCCAGACAGAATCCAAGCTATCCCAGATGGGACTCCTGCTGCACCAAAACAAACTGGAGGCTGGGCAACTTCTGCCTCACGTGCTGAAATTAAATTTGATTCGGATGGGAGATTTGATGATGAATACTTCCAACAAACTGAGGAGTCAAGTCGATTCAGGCAGGAATATGAAATGCGTAGAATAAAACAGGCAAAAGGATTGGATACATTGAAAAACATGGCATCTGATATGAATGAGGAACTGGATAGACAAGTTCCACTGATGGATGAGATTGACACTAAGGTGGACAAGGCATCCTCTGACCTCAAGAATACCAATGTTAGACTTAGAGACACAGTAACCCAGGTTATTTAA 693 0.4574 MSVIDILTRVDTICKKYDKYDVEKHKDSNLAGDDAFARLYASVDADIEALLQKAETASKDKGRASAVAINAEIRRTKARLLEEVPKLQKLAMKKVKGLSSQEFAARNDLVLALPDRIQAIPDGTPAAPKQTGGWATSASRAEIKFDSDGRFDDEYFQQTEESSRFRQEYEMRRIKQAKGLDTLKNMASDMNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLRDTVTQVI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi346g00046 230 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 180 225 IPR000727 -
Sebi346g00046 230 PANTHER SYNTAXIN 45 224 IPR045242 -
Sebi346g00046 230 Gene3D - 173 224 - -
Sebi346g00046 230 CDD SNARE_Qc 177 223 - -
Sebi346g00046 230 SUPERFAMILY SNARE fusion complex 178 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi346g00046 Sebi-Chr346 683356 685037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi346g00046 1 229 SNARE and Associated Proteins AT3G09740 71.008 9.77e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi346g00046 K08506 - gmx:100819272 399.823