Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi346g00040 ATGGGTAATATAGGAAGTAGCGGAGCACACAACCGTCGGAGACACAGTGGCAGCAACAGCGGCCGGCGAATTCATCCTCCGCCGCATCCGCCGGTGGCGGCACAGCCGGAAATGGCGGCCAACCGATTCGTGTACCCCGCCGCTGCTACCCCGTATCACAACTACCCAGGTTACTATCCGCCGCCACCGACAACTGGGCCGGTGCCTTTGCCGGCACCGTTCGATCACCATCACCGTCCGGCGATGGACCCAATGTGGGGGCGTTACCCGGCACCGCCGCCGCCGCAACCGGCTCCCTATGTAGAGCATCAGAAGGCGGTTACTATAAAGAACGATGTGAACATCAAGAAGGAGACTCTGAGGATTGAGCCTGATGAGGAAAATCCTGGCCATTTCCTTGTGTCATTCACTTTTGACGCCACCGTTTCTGGGAGGTAA 438 0.5868 MGNIGSSGAHNRRRHSGSNSGRRIHPPPHPPVAAQPEMAANRFVYPAAATPYHNYPGYYPPPPTTGPVPLPAPFDHHHRPAMDPMWGRYPAPPPPQPAPYVEHQKAVTIKNDVNIKKETLRIEPDEENPGHFLVSFTFDATVSGR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi346g00040 145 MobiDBLite consensus disorder prediction 55 76 - -
Sebi346g00040 145 MobiDBLite consensus disorder prediction 1 38 - -
Sebi346g00040 145 MobiDBLite consensus disorder prediction 55 74 - -
Sebi346g00040 145 PANTHER MAHOGUNIN 1 144 IPR045194 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi346g00040 Sebi-Chr346 638970 639407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi346g00040 89 145 C3H Transcription Factor Family AT3G09770 75.439 4.75e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi346g00040 - - gmx:100783831 190.66