Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi346g00006 ATGTTCAAAGTGCTGAGCAGGCACAACCAAGATGTGAACTCTTTGGTTTTGATTTCATCTAGAAAAACAAATGAGTCTATTGAGATTCTGAACTCATGCTTCCACATTCTTGATCGCACTTGTCAAGCAATTGACTTGAGGCATTTGGAGGAGAATTTGAAGAACACAATCAAGAATACTGTAAGCCAAGTTGCCAGAGAACACTTACCTACAGGTGTTAATGGAGAACTCCATCCTTCTAGATTTTGTGAGAAAGATTTGCTGAAAGTTGTCGATAGGGAGTATGTGTTTGCATATGTTGATGACCCCTGCAGTGCTACATACCCATTGATGCAAAAATTAAGGCAGGTTCTTGTGGACCATGCATTAGCAAATGCAGAGAGCGAGAAGAACCTGAACACTTCAATCTTTCAAAAGATTGCAACATTTGAGGAGGAATTAAAGGCTCTCTTACCAAAGGAGGTTGAAGGTGCAAAGGATTGCATATGA 489 0.4008 MFKVLSRHNQDVNSLVLISSRKTNESIEILNSCFHILDRTCQAIDLRHLEENLKNTIKNTVSQVAREHLPTGVNGELHPSRFCEKDLLKVVDREYVFAYVDDPCSATYPLMQKLRQVLVDHALANAESEKNLNTSIFQKIATFEEELKALLPKEVEGAKDCI 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi346g00006 162 PANTHER HISTIDINE AMMONIA-LYASE 6 159 IPR001106 -
Sebi346g00006 162 Gene3D - 50 162 IPR023144 -
Sebi346g00006 162 SUPERFAMILY L-aspartase-like 5 159 IPR008948 GO:0003824
Sebi346g00006 162 FunFam Phenylalanine ammonia-lyase 50 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi346g00006 Sebi-Chr346 70571 71059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi346g00006 7 159 Monolignol Biosynthesis Gene Families AT3G53260 74.675 1.27e-76 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi346g00006 K10775 - gmx:100803857 244.588