Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi344g00077 ATGACGCAGCAGAATGTGGTTGTGTCTGACCCAAAATCAGGGATCAACAGGGCTATTACCGTTGCACAAAAGCCACCCGTGGCTGCTCCTGGAGGCTACATTCCCATTCCAAGGAGGAGGATTTTGAAGAACCTTGAAATCAATGCATGGGTTGACTCCATGAGAGCCTCTTCTCCAACTCATGCCAAATCTACTCCTTCTCTGGCAGAAGAACACAGCTCTTGGATTTCATGTTTCCTTGACTATGATGGTACCTTATCACCTATCGTTGATGACCCTGATCGTGCTTTCATGTCTGATTCGGTTAATGAGAAAACCGTGAGGAAACTTGCAAGGTATTTTCCTACTGCTATAGTTACCGGCAGATGCAGAGACAAGGTTTACAATTTTGTTCGCTTGGCTGAGCTGTATTATGCTGGAAGCCATGGTATGGATATTAAGGGGCCAACAAGAGACTCTAAATACAATAAAGACAAAACAGCAGAGGCAGTTCTTTTTCAACCTGCCAGTGAATTTCTTCCCATGATAGATGAGGTGTATGAAAAATTGGTTGAGAAAACAAAATCTACTCCTGGTGCCAGAGTAGAGAACAACAAGTTCTGCCTCTCTGTTCATTTTCGCTGTGTTGATGAAAAGAAATGGAGTGAACTGGCACAGCAAGTGAAATCAGTGTTAAAAGATTACCCGAAGCTTCGTCGTAGCCAAGGAAGAAAGGTACTAGAGATTCGTCCCGATATTAAATGGGACAAAGGGAAGGCCCTGGAATTTCTGTTAGAGTCACTTGGATTTGCCAACTGTAACGATGTCTTTCCTGTATATATTGGTGATGATAAAACCGATGAAGATGCATTCAAGGTGATGGAGTTTCTTCAACGTTTGGTGGAGTTGAAACAAGTGTCCCTGAGAACACGTTCCCGGGTGTAA 924 0.4351 MTQQNVVVSDPKSGINRAITVAQKPPVAAPGGYIPIPRRRILKNLEINAWVDSMRASSPTHAKSTPSLAEEHSSWISCFLDYDGTLSPIVDDPDRAFMSDSVNEKTVRKLARYFPTAIVTGRCRDKVYNFVRLAELYYAGSHGMDIKGPTRDSKYNKDKTAEAVLFQPASEFLPMIDEVYEKLVEKTKSTPGARVENNKFCLSVHFRCVDEKKWSELAQQVKSVLKDYPKLRRSQGRKVLEIRPDIKWDKGKALEFLLESLGFANCNDVFPVYIGDDKTDEDAFKVMEFLQRLVELKQVSLRTRSRV 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi344g00077 307 SUPERFAMILY HAD-like 79 287 IPR036412 -
Sebi344g00077 307 CDD HAD_TPP 79 288 - -
Sebi344g00077 307 FunFam - 76 129 - -
Sebi344g00077 307 FunFam Trehalose 6-phosphate phosphatase 169 245 - -
Sebi344g00077 307 Gene3D - 159 245 - -
Sebi344g00077 307 NCBIfam HAD-IIB family hydrolase 79 288 IPR006379 -
Sebi344g00077 307 Pfam Trehalose-phosphatase 79 291 IPR003337 GO:0003824|GO:0005992
Sebi344g00077 307 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 31 288 IPR044651 GO:0004805|GO:0005992
Sebi344g00077 307 Gene3D - 79 287 IPR023214 -
Sebi344g00077 307 FunFam Trehalose 6-phosphate phosphatase 175 292 - -
Sebi344g00077 307 NCBIfam trehalose-phosphatase 78 288 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi344g00077 Sebi-Chr344 904113 906455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi344g00077 77 285 Trehalose Biosynthesis Gene Families AT1G70290 27.397 1.51e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi344g00077 K01087 - gmx:100794430 482.256