Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi344g00076 ATGAAGCACGTTGGCACTCCCACCGCGAAACCCACAAAACTCTACCGTGGGGTGAGACAGCGACATTGGGGGAAGTGGGTTGCTGAGATCAGACTCCCAAAAAACCGCACCCGACTCTGGCTTGGCACATTTGATACAGCAGAGGAAGCAGCTTTGGCTTATGACAATGCAGCATTTAAGCTTAGAGGTGAATTTGCACGCCTTAATTTCCCTCATCTTCGGCACCAAGGAGCACATGTTTTCGGTGAGTTTGGTGATTACAAGCCCCTCCCTTCCTCGGTAGATTCCAAGCTCCAAGCCATTTGTGAAAGCTTGGCCATTACTCAAAAACAGAGCAAAAACAGAGAAAACTCTGTTCAAGATGTAAAGCCTGTGGTGGCACAATCCAACAGTGAATTGGTTTGTCCTCTAGAGTTTGAGGATTTTAAGGTGGAGAATCCAATGTTGTCTGATGAATCTTCACATGGTTCATCTTCTCCTGAATCGTGTATTACTTTCTTGGATTTCTCGGATTGTAAGCAGAGGGATGAAGCAGAGAATTTTGGGTTGGAGAAGTACCCTTCTGTGGAGATTGATTGGGCAGCTATATGA 591 0.4602 MKHVGTPTAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAFKLRGEFARLNFPHLRHQGAHVFGEFGDYKPLPSSVDSKLQAICESLAITQKQSKNRENSVQDVKPVVAQSNSELVCPLEFEDFKVENPMLSDESSHGSSSPESCITFLDFSDCKQRDEAENFGLEKYPSVEIDWAAI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi344g00076 196 CDD AP2 13 73 IPR001471 GO:0003700|GO:0006355
Sebi344g00076 196 Gene3D AP2/ERF domain 14 72 IPR036955 GO:0003700|GO:0006355
Sebi344g00076 196 FunFam Ethylene-responsive transcription factor 2 13 72 - -
Sebi344g00076 196 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Sebi344g00076 196 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
Sebi344g00076 196 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 2 196 - -
Sebi344g00076 196 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
Sebi344g00076 196 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Sebi344g00076 196 Pfam AP2 domain 15 64 IPR001471 GO:0003700|GO:0006355
Sebi344g00076 196 SUPERFAMILY DNA-binding domain 14 72 IPR016177 GO:0003677
Sebi344g00076 196 PIRSF PTI6 92 189 IPR017392 GO:0003700
Sebi344g00076 196 PIRSF PTI6 1 79 IPR017392 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi344g00076 Sebi-Chr344 842338 842928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi344g00076 5 196 AP2-EREBP Transcription Factor Family AT1G78080 61.658 2.47e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi344g00076 AP2 1.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi344g00076 K09286 - gmx:100818839 281.567