Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi344g00036 ATGCTGAACACTACAATGGAGTTGGCTGCAAAGCTCCATCACACGCTCATTCTCGACGCACCCAAACCTTCTCTTCCCCCACTCTCCAATCGCGCCCTTATTATTAACACCAACCGATTCTTCGCCCCCAAAACACCCAATTTCGATGCTTCCGCATGTCGTTTATCCTCAGTTGCATACGACGCCGCCGAAACGACGACAACAGAAAATGAAAACGACGACATCGCTTCTCTGTTCTCCGACACCTCGAACGAACCCAACAGAAAACGCGGGAACAAGCAACCGAACACCGGTGCTTCCGGTGTCTCATCAGGTGTCAAGTTAGAGAACATTAGCAAAAGCTACAAAGGCGTCACCGTTTTGAAAGGCGTTAGCTGGGAAGTGAAGAAGGGTGAGAAAGTGGGTTTGGTTGGCGTAAACGGTGCGGGTAAAACGACCCAATTGAGAATAATTGCGGGTCAGGAAGACCCGGATTCAGGGAACGTGATTAAAGCGAAACCGAATACGAAAGTTGCGTTTTTGAGCCAGGAATTTGAGGTTTCACCGAGTAAAACGGTGAGGGAGGAGTTTCTGAGTGCTTTCAAGGAGGAAATGGAGATAGCAGGGAAGTTGGAGAAGGTGCAGAAGGCTCTGGAAGGTGCTGTGAATGATTTGGAGTTAATGGGGAGGCTTTTGGATGAGTTTGATTTGCTTCAGAGAAGGGCTCAGGATGTGAACTTGGATGAGGTGGATGCAAAGGTTGATAAGTTGATGCCAGAGCTTGGGTTTGCTCCTGAGGATTCTGATAGGTTGGTGGCTTCTTTTAGTGGAGGGTGGCAGATGAGAATGTCCCTTGGAAAAATTCTGCTTCAGGACCCGGATTTGTTACTGTTGGATGAACCCACGAATCACCTTGACCTTGACACCATTGAGTGGCTTGAAGATTATCTTAACAAGCAGGATGTGCCCATGGTTATCATTTCCCATGACAGAGCTTTTCTTGATCAGCTGTGTACTAAAATTGTGGAAACTGACATGGGTGTATCCAGGACATTTGAGGGAAATTATTCTCAGTATGTGGTTTCAAAGGCAGCATGGGTTGAAGCACAGTATACTGCATGGGAGAAGCAGCAGAAAGAAATTGAACAGACAAAAGACTTAATTAATAGGCTAGGTGCTGGAGCAAATTCTGGCCGTGCTTCATCTGCTGAAAAGAAGCTCGAGAGACTTCAGGGAGAGGAACTAGTAGAGAAGCCATTTCAACGAAAACAAATGAAAATCAGGTTCCCTGAGCGTGGAAGGAGTGGGAGATCTGTTGTAACAATTACGAACTTAGAATATGCCTTTGAGGATAAGGTACTTTTCAAGAAGGCAAATCTGACAATTGAAAGAGGAGAAAAGATTGCTATTGTTGGGCCAAATGGATGTGGCAAGAGTACTTTACTGAAATTGATAATGGGTTTAGAGAAGCCCACTGGGGGTGAAGTTATGCTTGGGGAGCATAATGTATTACCTAACTATTTTGAGCAAAATCAGGCAGAGGCACTTGATCTGGACAAGACTGTGCTTCAGACAGTAGAAGAAGCTGCGGAGGATTGGAAGATTGATGATATTAAAGGACTTCTTGGACGTTGTAATTTCAAATCTGACATGCTTGACCGAAAAGTTTCACTGTTGAGTGGTGGTGAGAAGGCACGCTTGGCGTTTTGTAAATTTATGGTAAAACCATCAACTCTACTTGTATTGGATGAACCAACCAATCACTTGGATATTCCTTCTAAAGAAATGCTTGAGGAGGCAATAACAGAGTACGAAGGCGCGGTTATCACAGTGTCTCACGATCGATACTTTATAAGACAGATAGTTAATAGAGTGATTGAAATTAAAGATGGCACTATACAGAATTATGCAGGCGATTACAATTATTATTTGGAGAAAAATCTTGATGCTAGGACTAGAGAGCTTGAGCGAGAGGCAGATCTAGAGGAGAAAGCTCCAAAAATCAAAGCCAAGTCTAAGATGTCCAAGGCTGAGAAAGAAGCACGGAAGAAACAGAAGATGCAGGCTTTTCAGGCTGCAAAGCAAAAGTCTAAAGGTTTGAAAAATGCAAAGAGATGGAACTGA 2103 0.4417 MLNTTMELAAKLHHTLILDAPKPSLPPLSNRALIINTNRFFAPKTPNFDASACRLSSVAYDAAETTTTENENDDIASLFSDTSNEPNRKRGNKQPNTGASGVSSGVKLENISKSYKGVTVLKGVSWEVKKGEKVGLVGVNGAGKTTQLRIIAGQEDPDSGNVIKAKPNTKVAFLSQEFEVSPSKTVREEFLSAFKEEMEIAGKLEKVQKALEGAVNDLELMGRLLDEFDLLQRRAQDVNLDEVDAKVDKLMPELGFAPEDSDRLVASFSGGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEDYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYVVSKAAWVEAQYTAWEKQQKEIEQTKDLINRLGAGANSGRASSAEKKLERLQGEELVEKPFQRKQMKIRFPERGRSGRSVVTITNLEYAFEDKVLFKKANLTIERGEKIAIVGPNGCGKSTLLKLIMGLEKPTGGEVMLGEHNVLPNYFEQNQAEALDLDKTVLQTVEEAAEDWKIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAITEYEGAVITVSHDRYFIRQIVNRVIEIKDGTIQNYAGDYNYYLEKNLDARTRELEREADLEEKAPKIKAKSKMSKAEKEARKKQKMQAFQAAKQKSKGLKNAKRWN 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi344g00036 700 MobiDBLite consensus disorder prediction 652 700 - -
Sebi344g00036 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 341 IPR027417 -
Sebi344g00036 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 106 364 IPR003439 GO:0005524
Sebi344g00036 700 FunFam Putative ABC transporter ATP-binding component 107 391 - -
Sebi344g00036 700 SMART AAA_5 457 625 IPR003593 GO:0016887
Sebi344g00036 700 SMART AAA_5 130 345 IPR003593 GO:0016887
Sebi344g00036 700 Pfam ABC transporter 335 422 IPR032781 -
Sebi344g00036 700 ProSitePatterns ABC transporters family signature. 552 566 IPR017871 GO:0005524|GO:0016887
Sebi344g00036 700 Coils Coil 660 689 - -
Sebi344g00036 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 413 638 IPR027417 -
Sebi344g00036 700 Pfam ABC transporter 449 580 IPR003439 GO:0005524
Sebi344g00036 700 CDD ABCF_EF-3 433 625 - -
Sebi344g00036 700 Coils Coil 638 658 - -
Sebi344g00036 700 Gene3D - 396 663 IPR027417 -
Sebi344g00036 700 MobiDBLite consensus disorder prediction 66 104 - -
Sebi344g00036 700 Gene3D - 103 388 IPR027417 -
Sebi344g00036 700 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 105 691 - -
Sebi344g00036 700 FunFam ABC transporter ATP-binding protein 393 660 - -
Sebi344g00036 700 CDD ABCF_EF-3 106 336 - -
Sebi344g00036 700 ProSitePatterns ABC transporters family signature. 268 282 IPR017871 GO:0005524|GO:0016887
Sebi344g00036 700 MobiDBLite consensus disorder prediction 652 680 - -
Sebi344g00036 700 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 433 648 IPR003439 GO:0005524
Sebi344g00036 700 Pfam ABC transporter 121 296 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi344g00036 Sebi-Chr344 400152 405154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi344g00036 430 650 Calmodulin-binding Proteins AT2G36910 25.506 4.96e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi344g00036 - - gmx:100796907 1089.72