Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi344g00033 ATGGACGATTACTATTTTGTAAACCCTCACCCTGACCCCAATTATGCTCACTCTGCTGCTATGACTCTACCCTCCTCTGAGTTCATACTATCCGATTTTCTCATGCTCGATGATTATGTTGATCATCATCAAGATTCTCAATCACAAAGTACTGAATCATCGGAGAAGGTATCCTTCAGCGATGCCAGTCACGGATTCAATGGAGCAACCTCTAAGAACAATAACATGCAAGTAAAATGCAAAAATGGGATTAGGAAAAATAAGGAAGAGGTGAGGCAGAGGATAGCGTTTAGAACCAGATCAGAGCTTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAATCCGTGAAGAATAGTCCGAATCTAAGGAACTACTATAAATGTTCAAGTGGAGGATGCAATGTGAAGAAAAGGGTGGAAAGGGATAGAGATGACTCGAGCTTGTCAATTACTAATGTATGTACCAAGAGAGACCAATTCCCCTTCTCCAATACTCCTATATCCCTAGCTCTAGGAAAGAAAATGCAGGGGAAGAACCGAGTTGGCATGCTATAA 567 0.4109 MDDYYFVNPHPDPNYAHSAAMTLPSSEFILSDFLMLDDYVDHHQDSQSQSTESSEKVSFSDASHGFNGATSKNNNMQVKCKNGIRKNKEEVRQRIAFRTRSELEIMDDGYKWRKYGKKSVKNSPNLRNYYKCSSGGCNVKKRVERDRDDSSLSITNVCTKRDQFPFSNTPISLALGKKMQGKNRVGML 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi344g00033 188 Gene3D WRKY domain 93 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi344g00033 188 SMART WRKY_cls 106 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi344g00033 188 ProSiteProfiles WRKY domain profile. 101 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi344g00033 188 SUPERFAMILY WRKY DNA-binding domain 98 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi344g00033 188 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 47 155 IPR044810 GO:0003700
Sebi344g00033 188 Pfam WRKY DNA -binding domain 107 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi344g00033 188 MobiDBLite consensus disorder prediction 44 75 - -
Sebi344g00033 188 MobiDBLite consensus disorder prediction 50 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi344g00033 Sebi-Chr344 376517 378729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi344g00033 94 155 WRKY Transcription Factor Family AT5G26170 75.806 5.23e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi344g00033 WRKY 1.2e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi344g00033 - - gmx:100500248 211.846