Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi344g00022 ATGTCAACAACTACTACTTCTCAAGCTATTGTATTTGAGGAGCAAAATCAGATGATGCCTATGCAAATGGGTTTCAATATTCATTTCCCAACAAACCTAACCTTTCAAGCTCCTTTGGGTTGCAATAATATTCAATCTTTGAAAGCCTTCAGTTCCATAGCTTCTTCACTTGCATCTGAAGATTCTACATCAAATCTAACAGAAACCCTATTCTCAAACACTGCTGATCATCATCATCAAAAATCAAGAGAATACCTAACTTCTAGCTTTGGTGGAGCTCAATTCCTTTCCTTGCATAGATCAAGTGTAAATCCATGGGCATTGGGAGAAGTAACTGATTGCTTCAGCAGTAAAAGAAGTGGTGATGATCATCATCATCTTGGAATCTCTGCCATGAAGATGAAGAAAATGAAGGCAAGAAGGAAGGTGAGAGAGCCAAGGTTTTGCTTCAAGACCATGAGTGATGTGGATGTGTTGGATGATGGTTACAAGTGGAGGAAGTATGGACAGAAAGTAGTGAAGAACACACAGCACCCCAGAAGCTACTACCGTTGCACACAAGATAATTGTCGTGTTAAGAAACGTGTGGAGCGGTTAGCGGAAGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGCACACTCTCCATCTAATGATCTTGAAGACTCTCAAACTCCATCTCAATTTACCAATTTCTTATGGTAG 711 0.4023 MSTTTTSQAIVFEEQNQMMPMQMGFNIHFPTNLTFQAPLGCNNIQSLKAFSSIASSLASEDSTSNLTETLFSNTADHHHQKSREYLTSSFGGAQFLSLHRSSVNPWALGEVTDCFSSKRSGDDHHHLGISAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDLEDSQTPSQFTNFLW 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi344g00022 236 SUPERFAMILY WRKY DNA-binding domain 151 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi344g00022 236 FunFam WRKY transcription factor 57 145 219 - -
Sebi344g00022 236 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi344g00022 236 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi344g00022 236 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 63 220 IPR044810 GO:0003700
Sebi344g00022 236 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi344g00022 236 Gene3D WRKY domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi344g00022 Sebi-Chr344 240047 241545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi344g00022 129 236 WRKY Transcription Factor Family AT4G39410 76.991 2.28e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi344g00022 WRKY 6.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi344g00022 - - pvu:PHAVU_002G266400g 343.969