Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi342g00027 ATGGAGGGGATGAAGAAGAAGGTGTTGTTGGGATCACCAGCTATGGTGCTCCTCTTTCTAGGTGTTGCTATGCTTCTCATGTTGCCAGGGGTCTCAGCTAAACGGTGGATTGTAGGAGAGAGCAATGGTTGGGGCACCAATTTTAACTACACTACATGGGCTAAGGGCAAGCATTTCTACAATGGTGATTGGCTCTTTTTTGTGTATGATAGGAACCAGATGAATGTGCTAGAAGTGAACAAGACAGATTATGAAAGCTGTAACTCTGATCATCCACTTCACAATTGGACTACTGGAGCTGGAAGAGATGTTGTTCCTTTGAATGTAACCCGCACTTACTATTTCATCAGTGGCAAGGGGTTCTGCTTTGGTGGCATGAAGATAGCTGTTCATGTTGAAAACCTCCCACCTCCACCAAAAGCTGCCCCTATAAAATCTGGGGCACCAACCCTTTCCTCTAGTGGCCACATTATTCTCATGCCTGTTGTGTTTGCCATTGGAGCAGCATGGGATGCATTCATTCATTTTTGGTAA 534 0.4513 MEGMKKKVLLGSPAMVLLFLGVAMLLMLPGVSAKRWIVGESNGWGTNFNYTTWAKGKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRTYYFISGKGFCFGGMKIAVHVENLPPPPKAAPIKSGAPTLSSSGHIILMPVVFAIGAAWDAFIHFW 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi342g00027 177 Pfam Plastocyanin-like domain 44 126 IPR003245 GO:0009055
Sebi342g00027 177 Gene3D - 32 135 IPR008972 -
Sebi342g00027 177 ProSiteProfiles Phytocyanin domain profile. 34 134 IPR003245 GO:0009055
Sebi342g00027 177 PANTHER BLUE COPPER PROTEIN 35 141 IPR039391 GO:0009055
Sebi342g00027 177 FunFam Lamin-like protein 32 135 - -
Sebi342g00027 177 SUPERFAMILY Cupredoxins 33 132 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi342g00027 Sebi-Chr342 553311 555040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi342g00027 14 177 Phytocyanin Superfamily AT5G15350 56.024 1.45e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi342g00027 - - mtr:11412511 301.597