Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi341g00036 ATGAAGGAGGGTGGTAGAAAACAAGGTGCAATGGCGCCATGTGCTGCATGCAAGCTTCTTCGAAGGAGATGTGCACAAGATTGTGTCTTTGCTCCTTATTTTCCTGCTGATGAACCCCAGAAGTTTGCCAGTGTTCACAAGGTTTTTGGAGCTAGCAATGTCAACAAAATGCTACAGGAATTACCAGAGCACCAACGAGGTGATGCAGTTAGCTCAATGGTATATGAAGCAAATGCAAGGGTGAGGGACCCTGTTTATGGATGTGTGGGAGCCATATCCTCTCTACAACAACAGGTTGATGTGTTACAAACCCAACTAGCACTTGCACAAGCAGAGGTTGTGCACATGAGATCAATGCGCCAAGTCTCAACTACTTCATCTGATCATCACCATCACCACAAATCACTCCCTTCAGCCTCTAATTCATCCTCAGAGAACTTATCACCATCAAGCACCAGGCTCTTGTCTTCACAAACCACCAAGTCCCTTTTTACCATGGACATGGTTGTTGATCAAGCTAACATGGGAGAGTCTTTGTGGTCATGCTAA 549 0.4554 MKEGGRKQGAMAPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMRSMRQVSTTSSDHHHHHKSLPSASNSSSENLSPSSTRLLSSQTTKSLFTMDMVVDQANMGESLWSC 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi341g00036 182 MobiDBLite consensus disorder prediction 119 154 - -
Sebi341g00036 182 Coils Coil 92 112 - -
Sebi341g00036 182 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Sebi341g00036 182 MobiDBLite consensus disorder prediction 137 154 - -
Sebi341g00036 182 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Sebi341g00036 182 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi341g00036 Sebi-Chr341 1053900 1059103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi341g00036 1 182 AS2 family AT1G31320 70.879 6.27e-78 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi341g00036 LOB 1.7e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi341g00036 - - sly:101262483 248.825